RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
POLB-208ENST00000520008 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
POLB-208ENST00000520008 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
POLB-208ENST00000520008 COA5Q86WW8 74 aa4.13□□□□□ -1.75
POLB-208ENST00000520008 SPINT4Q6UDR6 99 aa4.12□□□□□ -1.75
POLB-208ENST00000520008 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
POLB-208ENST00000520008 SERP1Q9Y6X1 66 aa4.1□□□□□ -1.75
POLB-208ENST00000520008 A0A1B0GU33 70 aa4.09□□□□□ -1.75
POLB-208ENST00000520008 K7ERU9 68 aa4.09□□□□□ -1.75
POLB-208ENST00000520008 SEC61GP60059 68 aa4.09□□□□□ -1.75
POLB-208ENST00000520008 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
POLB-208ENST00000520008 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
POLB-208ENST00000520008 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
POLB-208ENST00000520008 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
POLB-208ENST00000520008 TNP1P09430 55 aa3.97□□□□□ -1.77
POLB-208ENST00000520008 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
POLB-208ENST00000520008 A8MU10 97 aa3.96□□□□□ -1.78
POLB-208ENST00000520008 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
POLB-208ENST00000520008 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
POLB-208ENST00000520008 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
POLB-208ENST00000520008 H7BZZ5 65 aa3.92□□□□□ -1.78
POLB-208ENST00000520008 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
POLB-208ENST00000520008 A0A1B0GU69 56 aa3.9□□□□□ -1.79
POLB-208ENST00000520008 COX7CP15954 63 aa3.9□□□□□ -1.79
POLB-208ENST00000520008 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
POLB-208ENST00000520008 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
POLB-208ENST00000520008 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
POLB-208ENST00000520008 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
POLB-208ENST00000520008 PRR15LQ9BU68 103 aa3.7□□□□□ -1.82
POLB-208ENST00000520008 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
POLB-208ENST00000520008 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
POLB-208ENST00000520008 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
POLB-208ENST00000520008 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
POLB-208ENST00000520008 UQCR11O14957 56 aa3.6□□□□□ -1.83
POLB-208ENST00000520008 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
POLB-208ENST00000520008 ANAPC13Q9BS18 74 aa3.6□□□□□ -1.83
POLB-208ENST00000520008 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
POLB-208ENST00000520008 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
POLB-208ENST00000520008 MT1AP04731 61 aa3.56□□□□□ -1.84
POLB-208ENST00000520008 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
POLB-208ENST00000520008 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
POLB-208ENST00000520008 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
POLB-208ENST00000520008 MT3P25713 68 aa3.52□□□□□ -1.85
POLB-208ENST00000520008 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
POLB-208ENST00000520008 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
POLB-208ENST00000520008 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
POLB-208ENST00000520008 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
POLB-208ENST00000520008 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
POLB-208ENST00000520008 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
POLB-208ENST00000520008 K7ERS5 55 aa3.42□□□□□ -1.86
POLB-208ENST00000520008 TMEM258P61165 79 aa3.42□□□□□ -1.86
POLB-208ENST00000520008 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
POLB-208ENST00000520008 PSPHP1O15172 72 aa3.29□□□□□ -1.88
POLB-208ENST00000520008 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
POLB-208ENST00000520008 Q1T7F1 81 aa3.26□□□□□ -1.89
POLB-208ENST00000520008 V9GYY9 64 aa3.26□□□□□ -1.89
POLB-208ENST00000520008 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
POLB-208ENST00000520008 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
POLB-208ENST00000520008 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
POLB-208ENST00000520008 ROMO1P60602 79 aa3.19□□□□□ -1.9
POLB-208ENST00000520008 A6NED7 52 aa3.15□□□□□ -1.91
POLB-208ENST00000520008 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
POLB-208ENST00000520008 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
POLB-208ENST00000520008 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
POLB-208ENST00000520008 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
POLB-208ENST00000520008 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
POLB-208ENST00000520008 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
POLB-208ENST00000520008 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
POLB-208ENST00000520008 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
POLB-208ENST00000520008 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
POLB-208ENST00000520008 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
POLB-208ENST00000520008 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
POLB-208ENST00000520008 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
POLB-208ENST00000520008 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
POLB-208ENST00000520008 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
POLB-208ENST00000520008 PRM1P04553 51 aa1.62□□□□□ -2.15
POLB-208ENST00000520008 INE1O15225 51 aa1.61□□□□□ -2.15
POLB-208ENST00000520008 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 127.9 ms