RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
CPEB4-207ENST00000519835 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
CPEB4-207ENST00000519835 MT1GP13640 62 aa3.8□□□□□ -1.8
CPEB4-207ENST00000519835 MT1MQ8N339 61 aa3.8□□□□□ -1.8
CPEB4-207ENST00000519835 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
CPEB4-207ENST00000519835 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
CPEB4-207ENST00000519835 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
CPEB4-207ENST00000519835 CRCT1Q9UGL9 99 aa3.69□□□□□ -1.82
CPEB4-207ENST00000519835 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
CPEB4-207ENST00000519835 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
CPEB4-207ENST00000519835 MUC12Q9UKN1 5478 aa3.57□□□□□ -1.84
CPEB4-207ENST00000519835 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
CPEB4-207ENST00000519835 MT1AP04731 61 aa3.56□□□□□ -1.84
CPEB4-207ENST00000519835 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
CPEB4-207ENST00000519835 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
CPEB4-207ENST00000519835 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
CPEB4-207ENST00000519835 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
CPEB4-207ENST00000519835 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
CPEB4-207ENST00000519835 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
CPEB4-207ENST00000519835 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
CPEB4-207ENST00000519835 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
CPEB4-207ENST00000519835 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.86
CPEB4-207ENST00000519835 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
CPEB4-207ENST00000519835 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
CPEB4-207ENST00000519835 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
CPEB4-207ENST00000519835 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
CPEB4-207ENST00000519835 PRM1P04553 51 aa3.31□□□□□ -1.88
CPEB4-207ENST00000519835 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
CPEB4-207ENST00000519835 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
CPEB4-207ENST00000519835 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
CPEB4-207ENST00000519835 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
CPEB4-207ENST00000519835 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
CPEB4-207ENST00000519835 SPRR2EP22531 72 aa3.19□□□□□ -1.9
CPEB4-207ENST00000519835 SPRR2BP35325 72 aa3.19□□□□□ -1.9
CPEB4-207ENST00000519835 SPRR2AP35326 72 aa3.19□□□□□ -1.9
CPEB4-207ENST00000519835 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
CPEB4-207ENST00000519835 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
CPEB4-207ENST00000519835 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
CPEB4-207ENST00000519835 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
CPEB4-207ENST00000519835 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
CPEB4-207ENST00000519835 MT3P25713 68 aa3.1□□□□□ -1.91
CPEB4-207ENST00000519835 SPRR2DP22532 72 aa3.05□□□□□ -1.92
CPEB4-207ENST00000519835 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
CPEB4-207ENST00000519835 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
CPEB4-207ENST00000519835 KRTAP9-9Q9BYP9 154 aa2.97□□□□□ -1.93
CPEB4-207ENST00000519835 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
CPEB4-207ENST00000519835 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
CPEB4-207ENST00000519835 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
CPEB4-207ENST00000519835 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
CPEB4-207ENST00000519835 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
CPEB4-207ENST00000519835 NEBP20929 6669 aa2.75□□□□□ -1.97
CPEB4-207ENST00000519835 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CPEB4-207ENST00000519835 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
CPEB4-207ENST00000519835 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
CPEB4-207ENST00000519835 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
CPEB4-207ENST00000519835 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
CPEB4-207ENST00000519835 MT4P47944 62 aa2.65□□□□□ -1.99
CPEB4-207ENST00000519835 MUC5ACP98088 5654 aa2.56□□□□□ -2
CPEB4-207ENST00000519835 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
CPEB4-207ENST00000519835 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
CPEB4-207ENST00000519835 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
CPEB4-207ENST00000519835 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
CPEB4-207ENST00000519835 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
CPEB4-207ENST00000519835 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
CPEB4-207ENST00000519835 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
CPEB4-207ENST00000519835 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CPEB4-207ENST00000519835 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
CPEB4-207ENST00000519835 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
CPEB4-207ENST00000519835 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
CPEB4-207ENST00000519835 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
CPEB4-207ENST00000519835 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CPEB4-207ENST00000519835 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CPEB4-207ENST00000519835 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
CPEB4-207ENST00000519835 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
CPEB4-207ENST00000519835 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
CPEB4-207ENST00000519835 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
CPEB4-207ENST00000519835 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 153 ms