RNA–Protein interactions for RNA: ENST00000519604.5

ARFGAP1-212, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-212ENST00000519604 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
ARFGAP1-212ENST00000519604 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
ARFGAP1-212ENST00000519604 MT1LQ93083 61 aa4.68□□□□□ -1.66
ARFGAP1-212ENST00000519604 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
ARFGAP1-212ENST00000519604 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
ARFGAP1-212ENST00000519604 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.67
ARFGAP1-212ENST00000519604 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
ARFGAP1-212ENST00000519604 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
ARFGAP1-212ENST00000519604 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
ARFGAP1-212ENST00000519604 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
ARFGAP1-212ENST00000519604 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
ARFGAP1-212ENST00000519604 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
ARFGAP1-212ENST00000519604 MT1EP04732 61 aa4.61□□□□□ -1.67
ARFGAP1-212ENST00000519604 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.68
ARFGAP1-212ENST00000519604 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
ARFGAP1-212ENST00000519604 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
ARFGAP1-212ENST00000519604 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
ARFGAP1-212ENST00000519604 MT1GP13640 62 aa4.53□□□□□ -1.68
ARFGAP1-212ENST00000519604 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
ARFGAP1-212ENST00000519604 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
ARFGAP1-212ENST00000519604 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
ARFGAP1-212ENST00000519604 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
ARFGAP1-212ENST00000519604 PRM1P04553 51 aa4.4□□□□□ -1.71
ARFGAP1-212ENST00000519604 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
ARFGAP1-212ENST00000519604 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
ARFGAP1-212ENST00000519604 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
ARFGAP1-212ENST00000519604 MT1MQ8N339 61 aa4.29□□□□□ -1.72
ARFGAP1-212ENST00000519604 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
ARFGAP1-212ENST00000519604 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
ARFGAP1-212ENST00000519604 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
ARFGAP1-212ENST00000519604 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
ARFGAP1-212ENST00000519604 SPRR2EP22531 72 aa4.07□□□□□ -1.76
ARFGAP1-212ENST00000519604 SPRR2BP35325 72 aa4.07□□□□□ -1.76
ARFGAP1-212ENST00000519604 SPRR2AP35326 72 aa4.07□□□□□ -1.76
ARFGAP1-212ENST00000519604 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
ARFGAP1-212ENST00000519604 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
ARFGAP1-212ENST00000519604 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
ARFGAP1-212ENST00000519604 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
ARFGAP1-212ENST00000519604 MT1AP04731 61 aa4.01□□□□□ -1.77
ARFGAP1-212ENST00000519604 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
ARFGAP1-212ENST00000519604 SPRR2DP22532 72 aa3.89□□□□□ -1.79
ARFGAP1-212ENST00000519604 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
ARFGAP1-212ENST00000519604 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
ARFGAP1-212ENST00000519604 NEBP20929 6669 aa3.74□□□□□ -1.81
ARFGAP1-212ENST00000519604 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
ARFGAP1-212ENST00000519604 MT4P47944 62 aa3.56□□□□□ -1.84
ARFGAP1-212ENST00000519604 MT3P25713 68 aa3.46□□□□□ -1.86
ARFGAP1-212ENST00000519604 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
ARFGAP1-212ENST00000519604 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
ARFGAP1-212ENST00000519604 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
ARFGAP1-212ENST00000519604 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
ARFGAP1-212ENST00000519604 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
ARFGAP1-212ENST00000519604 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
ARFGAP1-212ENST00000519604 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
ARFGAP1-212ENST00000519604 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
ARFGAP1-212ENST00000519604 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
ARFGAP1-212ENST00000519604 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
ARFGAP1-212ENST00000519604 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
ARFGAP1-212ENST00000519604 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
ARFGAP1-212ENST00000519604 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
ARFGAP1-212ENST00000519604 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
ARFGAP1-212ENST00000519604 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
ARFGAP1-212ENST00000519604 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
ARFGAP1-212ENST00000519604 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
ARFGAP1-212ENST00000519604 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
ARFGAP1-212ENST00000519604 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
ARFGAP1-212ENST00000519604 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
ARFGAP1-212ENST00000519604 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
ARFGAP1-212ENST00000519604 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
ARFGAP1-212ENST00000519604 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
ARFGAP1-212ENST00000519604 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
ARFGAP1-212ENST00000519604 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
ARFGAP1-212ENST00000519604 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
ARFGAP1-212ENST00000519604 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
ARFGAP1-212ENST00000519604 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
ARFGAP1-212ENST00000519604 PHGR1C9JFL3 82 aa2□□□□□ -2.09
ARFGAP1-212ENST00000519604 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms