RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 SPRR2BP35325 72 aa7.87□□□□□ -1.15
PCM1-210ENST00000518936 SPRR2AP35326 72 aa7.87□□□□□ -1.15
PCM1-210ENST00000518936 MT1EP04732 61 aa7.85□□□□□ -1.15
PCM1-210ENST00000518936 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
PCM1-210ENST00000518936 LCE1AQ5T7P2 110 aa7.8□□□□□ -1.16
PCM1-210ENST00000518936 KRTAP19-3Q7Z4W3 81 aa7.71□□□□□ -1.18
PCM1-210ENST00000518936 KRTAP2-2Q9BYT5 123 aa7.71□□□□□ -1.18
PCM1-210ENST00000518936 KRTAP2-1Q9BYU5 128 aa7.71□□□□□ -1.18
PCM1-210ENST00000518936 KRTAP19-4Q3LI73 84 aa7.65□□□□□ -1.18
PCM1-210ENST00000518936 MT1GP13640 62 aa7.64□□□□□ -1.19
PCM1-210ENST00000518936 SPRR2DP22532 72 aa7.62□□□□□ -1.19
PCM1-210ENST00000518936 LCE5AQ5TCM9 118 aa7.61□□□□□ -1.19
PCM1-210ENST00000518936 MT1LQ93083 61 aa7.61□□□□□ -1.19
PCM1-210ENST00000518936 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
PCM1-210ENST00000518936 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
PCM1-210ENST00000518936 MT1MQ8N339 61 aa7.42□□□□□ -1.22
PCM1-210ENST00000518936 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
PCM1-210ENST00000518936 GPR98Q8WXG9 6306 aa7.34□□□□□ -1.23
PCM1-210ENST00000518936 PRAC1Q96KF2 57 aa7.31□□□□□ -1.24
PCM1-210ENST00000518936 LCE3CQ5T5A8 94 aa7.25□□□□□ -1.25
PCM1-210ENST00000518936 DSTQ03001 7570 aaKnown RBP7.15□□□□□ -1.26
PCM1-210ENST00000518936 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
PCM1-210ENST00000518936 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
PCM1-210ENST00000518936 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
PCM1-210ENST00000518936 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
PCM1-210ENST00000518936 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
PCM1-210ENST00000518936 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
PCM1-210ENST00000518936 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
PCM1-210ENST00000518936 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
PCM1-210ENST00000518936 KRTAP5-4Q6L8H1 288 aa6.73□□□□□ -1.33
PCM1-210ENST00000518936 KRTAP5-5Q701N2 237 aaPredicted RBP6.73□□□□□ -1.33
PCM1-210ENST00000518936 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
PCM1-210ENST00000518936 KRTAP9-6A8MVA2 160 aa6.65□□□□□ -1.34
PCM1-210ENST00000518936 HMCN1Q96RW7 5635 aa6.64□□□□□ -1.35
PCM1-210ENST00000518936 KRTAP5-10Q6L8G5 202 aa6.6□□□□□ -1.35
PCM1-210ENST00000518936 MT4P47944 62 aa6.59□□□□□ -1.35
PCM1-210ENST00000518936 KRTAP12-4P60329 112 aa6.57□□□□□ -1.36
PCM1-210ENST00000518936 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
PCM1-210ENST00000518936 MT1AP04731 61 aa6.52□□□□□ -1.37
PCM1-210ENST00000518936 KRTAP5-7Q6L8G8 165 aa6.43□□□□□ -1.38
PCM1-210ENST00000518936 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
PCM1-210ENST00000518936 KRTAP6-1Q3LI64 71 aa6.36□□□□□ -1.39
PCM1-210ENST00000518936 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
PCM1-210ENST00000518936 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
PCM1-210ENST00000518936 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
PCM1-210ENST00000518936 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
PCM1-210ENST00000518936 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
PCM1-210ENST00000518936 MT3P25713 68 aa6.01□□□□□ -1.45
PCM1-210ENST00000518936 KRTAP5-2Q701N4 177 aa5.99□□□□□ -1.45
PCM1-210ENST00000518936 KRTAP6-2Q3LI66 62 aa5.98□□□□□ -1.45
PCM1-210ENST00000518936 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
PCM1-210ENST00000518936 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
PCM1-210ENST00000518936 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
PCM1-210ENST00000518936 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
PCM1-210ENST00000518936 MUC5ACP98088 5654 aa5.58□□□□□ -1.52
PCM1-210ENST00000518936 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
PCM1-210ENST00000518936 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
PCM1-210ENST00000518936 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
PCM1-210ENST00000518936 OBSCNQ5VST9 7968 aa5.4□□□□□ -1.54
PCM1-210ENST00000518936 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
PCM1-210ENST00000518936 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
PCM1-210ENST00000518936 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
PCM1-210ENST00000518936 LCE3EQ5T5B0 92 aa5.19□□□□□ -1.58
PCM1-210ENST00000518936 A0A0A0MQY5 61 aa4.98□□□□□ -1.61
PCM1-210ENST00000518936 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
PCM1-210ENST00000518936 LCE1BQ5T7P3 118 aa4.96□□□□□ -1.62
PCM1-210ENST00000518936 H3BS24 57 aa4.8□□□□□ -1.64
PCM1-210ENST00000518936 INE1O15225 51 aa4.78□□□□□ -1.64
PCM1-210ENST00000518936 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
PCM1-210ENST00000518936 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
PCM1-210ENST00000518936 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
PCM1-210ENST00000518936 PRM1P04553 51 aa4.19□□□□□ -1.74
PCM1-210ENST00000518936 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
PCM1-210ENST00000518936 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
PCM1-210ENST00000518936 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
PCM1-210ENST00000518936 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
PCM1-210ENST00000518936 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
PCM1-210ENST00000518936 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 78.5 ms