RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FSIP2Q5CZC0 6907 aa5.49□□□□□ -1.53
PCDHGA11-202ENST00000518882 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
PCDHGA11-202ENST00000518882 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
PCDHGA11-202ENST00000518882 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
PCDHGA11-202ENST00000518882 FCGBPQ9Y6R7 5405 aaPredicted RBP5.4□□□□□ -1.54
PCDHGA11-202ENST00000518882 MT1GP13640 62 aa5.36□□□□□ -1.55
PCDHGA11-202ENST00000518882 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
PCDHGA11-202ENST00000518882 MT1MQ8N339 61 aa5.3□□□□□ -1.56
PCDHGA11-202ENST00000518882 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
PCDHGA11-202ENST00000518882 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
PCDHGA11-202ENST00000518882 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
PCDHGA11-202ENST00000518882 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
PCDHGA11-202ENST00000518882 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
PCDHGA11-202ENST00000518882 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
PCDHGA11-202ENST00000518882 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
PCDHGA11-202ENST00000518882 SPRR2FQ96RM1 72 aa5.04□□□□□ -1.6
PCDHGA11-202ENST00000518882 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
PCDHGA11-202ENST00000518882 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
PCDHGA11-202ENST00000518882 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
PCDHGA11-202ENST00000518882 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.9□□□□□ -1.63
PCDHGA11-202ENST00000518882 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
PCDHGA11-202ENST00000518882 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
PCDHGA11-202ENST00000518882 MT1AP04731 61 aa4.8□□□□□ -1.64
PCDHGA11-202ENST00000518882 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
PCDHGA11-202ENST00000518882 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
PCDHGA11-202ENST00000518882 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
PCDHGA11-202ENST00000518882 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
PCDHGA11-202ENST00000518882 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
PCDHGA11-202ENST00000518882 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
PCDHGA11-202ENST00000518882 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
PCDHGA11-202ENST00000518882 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
PCDHGA11-202ENST00000518882 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
PCDHGA11-202ENST00000518882 SPRR2EP22531 72 aa4.53□□□□□ -1.68
PCDHGA11-202ENST00000518882 SPRR2BP35325 72 aa4.53□□□□□ -1.68
PCDHGA11-202ENST00000518882 SPRR2AP35326 72 aa4.53□□□□□ -1.68
PCDHGA11-202ENST00000518882 PRM1P04553 51 aa4.52□□□□□ -1.69
PCDHGA11-202ENST00000518882 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
PCDHGA11-202ENST00000518882 NEBP20929 6669 aa4.44□□□□□ -1.7
PCDHGA11-202ENST00000518882 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
PCDHGA11-202ENST00000518882 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
PCDHGA11-202ENST00000518882 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
PCDHGA11-202ENST00000518882 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
PCDHGA11-202ENST00000518882 SPRR2DP22532 72 aa4.32□□□□□ -1.72
PCDHGA11-202ENST00000518882 MT3P25713 68 aa4.25□□□□□ -1.73
PCDHGA11-202ENST00000518882 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.73
PCDHGA11-202ENST00000518882 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
PCDHGA11-202ENST00000518882 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
PCDHGA11-202ENST00000518882 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
PCDHGA11-202ENST00000518882 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
PCDHGA11-202ENST00000518882 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
PCDHGA11-202ENST00000518882 MT4P47944 62 aa3.85□□□□□ -1.79
PCDHGA11-202ENST00000518882 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
PCDHGA11-202ENST00000518882 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
PCDHGA11-202ENST00000518882 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
PCDHGA11-202ENST00000518882 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
PCDHGA11-202ENST00000518882 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
PCDHGA11-202ENST00000518882 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
PCDHGA11-202ENST00000518882 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PCDHGA11-202ENST00000518882 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
PCDHGA11-202ENST00000518882 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
PCDHGA11-202ENST00000518882 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
PCDHGA11-202ENST00000518882 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
PCDHGA11-202ENST00000518882 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
PCDHGA11-202ENST00000518882 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
PCDHGA11-202ENST00000518882 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
PCDHGA11-202ENST00000518882 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
PCDHGA11-202ENST00000518882 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
PCDHGA11-202ENST00000518882 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.92
PCDHGA11-202ENST00000518882 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
PCDHGA11-202ENST00000518882 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PCDHGA11-202ENST00000518882 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
PCDHGA11-202ENST00000518882 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
PCDHGA11-202ENST00000518882 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
PCDHGA11-202ENST00000518882 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
PCDHGA11-202ENST00000518882 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
PCDHGA11-202ENST00000518882 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
PCDHGA11-202ENST00000518882 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 741.2 ms