RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 TNP1P09430 55 aa4.31□□□□□ -1.72
MRPS28-202ENST00000518271 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
MRPS28-202ENST00000518271 TMEM258P61165 79 aa4.29□□□□□ -1.72
MRPS28-202ENST00000518271 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
MRPS28-202ENST00000518271 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
MRPS28-202ENST00000518271 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
MRPS28-202ENST00000518271 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
MRPS28-202ENST00000518271 V9GYY9 64 aa4.22□□□□□ -1.73
MRPS28-202ENST00000518271 UQCR11O14957 56 aa4.21□□□□□ -1.74
MRPS28-202ENST00000518271 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
MRPS28-202ENST00000518271 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
MRPS28-202ENST00000518271 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
MRPS28-202ENST00000518271 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
MRPS28-202ENST00000518271 MT4P47944 62 aa4.15□□□□□ -1.75
MRPS28-202ENST00000518271 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
MRPS28-202ENST00000518271 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
MRPS28-202ENST00000518271 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
MRPS28-202ENST00000518271 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
MRPS28-202ENST00000518271 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
MRPS28-202ENST00000518271 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
MRPS28-202ENST00000518271 PSPHP1O15172 72 aa4.05□□□□□ -1.76
MRPS28-202ENST00000518271 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
MRPS28-202ENST00000518271 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
MRPS28-202ENST00000518271 Q1T7F1 81 aa4.04□□□□□ -1.76
MRPS28-202ENST00000518271 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
MRPS28-202ENST00000518271 K7ERS5 55 aa3.97□□□□□ -1.77
MRPS28-202ENST00000518271 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
MRPS28-202ENST00000518271 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
MRPS28-202ENST00000518271 H3BS24 57 aa3.94□□□□□ -1.78
MRPS28-202ENST00000518271 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
MRPS28-202ENST00000518271 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
MRPS28-202ENST00000518271 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
MRPS28-202ENST00000518271 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
MRPS28-202ENST00000518271 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
MRPS28-202ENST00000518271 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
MRPS28-202ENST00000518271 A6NED7 52 aa3.88□□□□□ -1.79
MRPS28-202ENST00000518271 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
MRPS28-202ENST00000518271 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
MRPS28-202ENST00000518271 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
MRPS28-202ENST00000518271 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
MRPS28-202ENST00000518271 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
MRPS28-202ENST00000518271 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
MRPS28-202ENST00000518271 ROMO1P60602 79 aa3.77□□□□□ -1.81
MRPS28-202ENST00000518271 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
MRPS28-202ENST00000518271 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
MRPS28-202ENST00000518271 MT1AP04731 61 aa3.71□□□□□ -1.82
MRPS28-202ENST00000518271 KRTAP6-1Q3LI64 71 aa3.71□□□□□ -1.82
MRPS28-202ENST00000518271 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
MRPS28-202ENST00000518271 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
MRPS28-202ENST00000518271 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
MRPS28-202ENST00000518271 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
MRPS28-202ENST00000518271 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
MRPS28-202ENST00000518271 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
MRPS28-202ENST00000518271 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
MRPS28-202ENST00000518271 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
MRPS28-202ENST00000518271 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
MRPS28-202ENST00000518271 MT3P25713 68 aa3.34□□□□□ -1.87
MRPS28-202ENST00000518271 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
MRPS28-202ENST00000518271 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
MRPS28-202ENST00000518271 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
MRPS28-202ENST00000518271 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
MRPS28-202ENST00000518271 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
MRPS28-202ENST00000518271 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
MRPS28-202ENST00000518271 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
MRPS28-202ENST00000518271 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
MRPS28-202ENST00000518271 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
MRPS28-202ENST00000518271 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
MRPS28-202ENST00000518271 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
MRPS28-202ENST00000518271 INE1O15225 51 aa2.58□□□□□ -2
MRPS28-202ENST00000518271 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
MRPS28-202ENST00000518271 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
MRPS28-202ENST00000518271 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
MRPS28-202ENST00000518271 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
MRPS28-202ENST00000518271 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
MRPS28-202ENST00000518271 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
MRPS28-202ENST00000518271 PRM1P04553 51 aa1.95□□□□□ -2.1
MRPS28-202ENST00000518271 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
MRPS28-202ENST00000518271 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 116 ms