RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
LINCR-0001-202ENST00000518098 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
LINCR-0001-202ENST00000518098 MT1BP07438 61 aa2.67□□□□□ -1.98
LINCR-0001-202ENST00000518098 P0C880 135 aa2.66□□□□□ -1.98
LINCR-0001-202ENST00000518098 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
LINCR-0001-202ENST00000518098 KRTAP15-1Q3LI76 137 aa2.64□□□□□ -1.99
LINCR-0001-202ENST00000518098 SPRR2DP22532 72 aa2.62□□□□□ -1.99
LINCR-0001-202ENST00000518098 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
LINCR-0001-202ENST00000518098 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
LINCR-0001-202ENST00000518098 S4R3F8 94 aa2.59□□□□□ -1.99
LINCR-0001-202ENST00000518098 NDUFAF8A1L188 74 aa2.56□□□□□ -2
LINCR-0001-202ENST00000518098 KRTAP12-2P59991 146 aa2.56□□□□□ -2
LINCR-0001-202ENST00000518098 PLAC4Q8WY50 150 aa2.54□□□□□ -2
LINCR-0001-202ENST00000518098 DSTQ03001 7570 aaKnown RBP2.5□□□□□ -2.01
LINCR-0001-202ENST00000518098 A0A0D9SG42 100 aa2.49□□□□□ -2.01
LINCR-0001-202ENST00000518098 C10orf95Q9H7T3 257 aa2.49□□□□□ -2.01
LINCR-0001-202ENST00000518098 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
LINCR-0001-202ENST00000518098 M0QZ58 72 aa2.47□□□□□ -2.01
LINCR-0001-202ENST00000518098 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
LINCR-0001-202ENST00000518098 MT1XP80297 61 aa2.45□□□□□ -2.02
LINCR-0001-202ENST00000518098 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
LINCR-0001-202ENST00000518098 R4GN34 69 aa2.41□□□□□ -2.02
LINCR-0001-202ENST00000518098 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
LINCR-0001-202ENST00000518098 KRTAP10-12P60413 245 aa2.38□□□□□ -2.03
LINCR-0001-202ENST00000518098 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
LINCR-0001-202ENST00000518098 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
LINCR-0001-202ENST00000518098 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
LINCR-0001-202ENST00000518098 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
LINCR-0001-202ENST00000518098 KRTAP10-7P60409 375 aaPredicted RBP2.3□□□□□ -2.04
LINCR-0001-202ENST00000518098 CAMK2N1Q7Z7J9 78 aa2.3□□□□□ -2.04
LINCR-0001-202ENST00000518098 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
LINCR-0001-202ENST00000518098 MT4P47944 62 aa2.27□□□□□ -2.05
LINCR-0001-202ENST00000518098 MT1GP13640 62 aa2.25□□□□□ -2.05
LINCR-0001-202ENST00000518098 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
LINCR-0001-202ENST00000518098 MT1EP04732 61 aa2.22□□□□□ -2.05
LINCR-0001-202ENST00000518098 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
LINCR-0001-202ENST00000518098 TNP1P09430 55 aa2.2□□□□□ -2.06
LINCR-0001-202ENST00000518098 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
LINCR-0001-202ENST00000518098 INE1O15225 51 aa2.19□□□□□ -2.06
LINCR-0001-202ENST00000518098 MT1MQ8N339 61 aa2.13□□□□□ -2.07
LINCR-0001-202ENST00000518098 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
LINCR-0001-202ENST00000518098 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
LINCR-0001-202ENST00000518098 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
LINCR-0001-202ENST00000518098 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
LINCR-0001-202ENST00000518098 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
LINCR-0001-202ENST00000518098 MT3P25713 68 aa2.08□□□□□ -2.08
LINCR-0001-202ENST00000518098 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
LINCR-0001-202ENST00000518098 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
LINCR-0001-202ENST00000518098 MT1LQ93083 61 aa2.07□□□□□ -2.08
LINCR-0001-202ENST00000518098 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
LINCR-0001-202ENST00000518098 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
LINCR-0001-202ENST00000518098 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
LINCR-0001-202ENST00000518098 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
LINCR-0001-202ENST00000518098 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
LINCR-0001-202ENST00000518098 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
LINCR-0001-202ENST00000518098 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
LINCR-0001-202ENST00000518098 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
LINCR-0001-202ENST00000518098 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
LINCR-0001-202ENST00000518098 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
LINCR-0001-202ENST00000518098 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
LINCR-0001-202ENST00000518098 LCE3CQ5T5A8 94 aa1.8□□□□□ -2.12
LINCR-0001-202ENST00000518098 MT1AP04731 61 aa1.79□□□□□ -2.12
LINCR-0001-202ENST00000518098 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
LINCR-0001-202ENST00000518098 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
LINCR-0001-202ENST00000518098 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
LINCR-0001-202ENST00000518098 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
LINCR-0001-202ENST00000518098 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
LINCR-0001-202ENST00000518098 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
LINCR-0001-202ENST00000518098 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
LINCR-0001-202ENST00000518098 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
LINCR-0001-202ENST00000518098 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
LINCR-0001-202ENST00000518098 PRM1P04553 51 aa1.41□□□□□ -2.18
LINCR-0001-202ENST00000518098 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
LINCR-0001-202ENST00000518098 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
LINCR-0001-202ENST00000518098 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
LINCR-0001-202ENST00000518098 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
LINCR-0001-202ENST00000518098 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 115.1 ms