RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 SPINT4Q6UDR6 99 aa2.86□□□□□ -1.95
CPS1-210ENST00000518043 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
CPS1-210ENST00000518043 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
CPS1-210ENST00000518043 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
CPS1-210ENST00000518043 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
CPS1-210ENST00000518043 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
CPS1-210ENST00000518043 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
CPS1-210ENST00000518043 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CPS1-210ENST00000518043 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
CPS1-210ENST00000518043 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
CPS1-210ENST00000518043 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
CPS1-210ENST00000518043 K7ERS5 55 aa2.75□□□□□ -1.97
CPS1-210ENST00000518043 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
CPS1-210ENST00000518043 PRO2289Q9P1D8 64 aa2.73□□□□□ -1.97
CPS1-210ENST00000518043 ROMO1P60602 79 aa2.71□□□□□ -1.98
CPS1-210ENST00000518043 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
CPS1-210ENST00000518043 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
CPS1-210ENST00000518043 PMAIP1Q13794 54 aa2.68□□□□□ -1.98
CPS1-210ENST00000518043 KMT2DO14686 5537 aa2.67□□□□□ -1.98
CPS1-210ENST00000518043 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
CPS1-210ENST00000518043 TNP1P09430 55 aa2.65□□□□□ -1.99
CPS1-210ENST00000518043 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
CPS1-210ENST00000518043 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
CPS1-210ENST00000518043 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CPS1-210ENST00000518043 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
CPS1-210ENST00000518043 KRTAP19-7Q3SYF9 63 aa2.58□□□□□ -2
CPS1-210ENST00000518043 PP632Q6XCG6 107 aa2.58□□□□□ -2
CPS1-210ENST00000518043 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
CPS1-210ENST00000518043 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
CPS1-210ENST00000518043 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
CPS1-210ENST00000518043 KRTAP19-5Q3LI72 72 aa2.55□□□□□ -2
CPS1-210ENST00000518043 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
CPS1-210ENST00000518043 MT1EP04732 61 aa2.52□□□□□ -2.01
CPS1-210ENST00000518043 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
CPS1-210ENST00000518043 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
CPS1-210ENST00000518043 NEBP20929 6669 aa2.48□□□□□ -2.01
CPS1-210ENST00000518043 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
CPS1-210ENST00000518043 MT1LQ93083 61 aa2.46□□□□□ -2.02
CPS1-210ENST00000518043 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CPS1-210ENST00000518043 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CPS1-210ENST00000518043 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
CPS1-210ENST00000518043 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
CPS1-210ENST00000518043 SPRR2EP22531 72 aa2.38□□□□□ -2.03
CPS1-210ENST00000518043 SPRR2BP35325 72 aa2.38□□□□□ -2.03
CPS1-210ENST00000518043 SPRR2AP35326 72 aa2.38□□□□□ -2.03
CPS1-210ENST00000518043 MT1MQ8N339 61 aa2.38□□□□□ -2.03
CPS1-210ENST00000518043 MT1GP13640 62 aa2.36□□□□□ -2.03
CPS1-210ENST00000518043 SPRR2DP22532 72 aa2.29□□□□□ -2.04
CPS1-210ENST00000518043 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
CPS1-210ENST00000518043 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
CPS1-210ENST00000518043 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
CPS1-210ENST00000518043 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
CPS1-210ENST00000518043 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
CPS1-210ENST00000518043 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
CPS1-210ENST00000518043 KRTAP2-1Q9BYU5 128 aa2.13□□□□□ -2.07
CPS1-210ENST00000518043 MT1AP04731 61 aa2.09□□□□□ -2.07
CPS1-210ENST00000518043 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
CPS1-210ENST00000518043 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
CPS1-210ENST00000518043 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
CPS1-210ENST00000518043 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
CPS1-210ENST00000518043 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.09
CPS1-210ENST00000518043 MT4P47944 62 aa1.99□□□□□ -2.09
CPS1-210ENST00000518043 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
CPS1-210ENST00000518043 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
CPS1-210ENST00000518043 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
CPS1-210ENST00000518043 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
CPS1-210ENST00000518043 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
CPS1-210ENST00000518043 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
CPS1-210ENST00000518043 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
CPS1-210ENST00000518043 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
CPS1-210ENST00000518043 INE1O15225 51 aa1.69□□□□□ -2.14
CPS1-210ENST00000518043 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
CPS1-210ENST00000518043 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
CPS1-210ENST00000518043 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
CPS1-210ENST00000518043 PRM1P04553 51 aa1.42□□□□□ -2.18
CPS1-210ENST00000518043 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CPS1-210ENST00000518043 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
CPS1-210ENST00000518043 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 129.5 ms