RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ROMO1P60602 79 aa3.4□□□□□ -1.87
PVT1-206ENST00000517838 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
PVT1-206ENST00000517838 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
PVT1-206ENST00000517838 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
PVT1-206ENST00000517838 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
PVT1-206ENST00000517838 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
PVT1-206ENST00000517838 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
PVT1-206ENST00000517838 CRIPTQ9P021 101 aa3.33□□□□□ -1.88
PVT1-206ENST00000517838 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
PVT1-206ENST00000517838 MT1BP07438 61 aa3.29□□□□□ -1.88
PVT1-206ENST00000517838 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
PVT1-206ENST00000517838 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
PVT1-206ENST00000517838 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
PVT1-206ENST00000517838 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
PVT1-206ENST00000517838 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
PVT1-206ENST00000517838 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PVT1-206ENST00000517838 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
PVT1-206ENST00000517838 PLAC4Q8WY50 150 aa3.2□□□□□ -1.9
PVT1-206ENST00000517838 SPRR2GQ9BYE4 73 aa3.2□□□□□ -1.9
PVT1-206ENST00000517838 SPRR2EP22531 72 aa3.19□□□□□ -1.9
PVT1-206ENST00000517838 SPRR2BP35325 72 aa3.19□□□□□ -1.9
PVT1-206ENST00000517838 SPRR2AP35326 72 aa3.19□□□□□ -1.9
PVT1-206ENST00000517838 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
PVT1-206ENST00000517838 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
PVT1-206ENST00000517838 TNP1P09430 55 aa3.12□□□□□ -1.91
PVT1-206ENST00000517838 SPRR2DP22532 72 aa3.09□□□□□ -1.91
PVT1-206ENST00000517838 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
PVT1-206ENST00000517838 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
PVT1-206ENST00000517838 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
PVT1-206ENST00000517838 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
PVT1-206ENST00000517838 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
PVT1-206ENST00000517838 MT1XP80297 61 aa3.01□□□□□ -1.93
PVT1-206ENST00000517838 NDUFAF8A1L188 74 aa3□□□□□ -1.93
PVT1-206ENST00000517838 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
PVT1-206ENST00000517838 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
PVT1-206ENST00000517838 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
PVT1-206ENST00000517838 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
PVT1-206ENST00000517838 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
PVT1-206ENST00000517838 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
PVT1-206ENST00000517838 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
PVT1-206ENST00000517838 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
PVT1-206ENST00000517838 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
PVT1-206ENST00000517838 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
PVT1-206ENST00000517838 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
PVT1-206ENST00000517838 MT4P47944 62 aa2.74□□□□□ -1.97
PVT1-206ENST00000517838 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
PVT1-206ENST00000517838 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
PVT1-206ENST00000517838 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
PVT1-206ENST00000517838 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
PVT1-206ENST00000517838 MT1EP04732 61 aa2.69□□□□□ -1.98
PVT1-206ENST00000517838 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
PVT1-206ENST00000517838 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
PVT1-206ENST00000517838 MT1GP13640 62 aa2.61□□□□□ -1.99
PVT1-206ENST00000517838 MT1MQ8N339 61 aa2.57□□□□□ -2
PVT1-206ENST00000517838 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
PVT1-206ENST00000517838 MT1LQ93083 61 aa2.54□□□□□ -2
PVT1-206ENST00000517838 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
PVT1-206ENST00000517838 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
PVT1-206ENST00000517838 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
PVT1-206ENST00000517838 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
PVT1-206ENST00000517838 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
PVT1-206ENST00000517838 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
PVT1-206ENST00000517838 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
PVT1-206ENST00000517838 INE1O15225 51 aa2.34□□□□□ -2.03
PVT1-206ENST00000517838 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
PVT1-206ENST00000517838 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PVT1-206ENST00000517838 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
PVT1-206ENST00000517838 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
PVT1-206ENST00000517838 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
PVT1-206ENST00000517838 MT1AP04731 61 aa2.17□□□□□ -2.06
PVT1-206ENST00000517838 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
PVT1-206ENST00000517838 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
PVT1-206ENST00000517838 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
PVT1-206ENST00000517838 PRM1P04553 51 aa1.8□□□□□ -2.12
PVT1-206ENST00000517838 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
PVT1-206ENST00000517838 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
PVT1-206ENST00000517838 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
PVT1-206ENST00000517838 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms