RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
MCM4-202ENST00000517709 A0A1B0GU69 56 aa4.34□□□□□ -1.71
MCM4-202ENST00000517709 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
MCM4-202ENST00000517709 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
MCM4-202ENST00000517709 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
MCM4-202ENST00000517709 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
MCM4-202ENST00000517709 MT1LQ93083 61 aa4.24□□□□□ -1.73
MCM4-202ENST00000517709 MT1MQ8N339 61 aa4.23□□□□□ -1.73
MCM4-202ENST00000517709 MT1GP13640 62 aa4.21□□□□□ -1.74
MCM4-202ENST00000517709 ATP5EP56381 51 aaPredicted RBP4.21□□□□□ -1.74
MCM4-202ENST00000517709 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
MCM4-202ENST00000517709 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
MCM4-202ENST00000517709 TNP1P09430 55 aa4.15□□□□□ -1.75
MCM4-202ENST00000517709 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
MCM4-202ENST00000517709 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
MCM4-202ENST00000517709 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
MCM4-202ENST00000517709 TMEM258P61165 79 aa4.12□□□□□ -1.75
MCM4-202ENST00000517709 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
MCM4-202ENST00000517709 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
MCM4-202ENST00000517709 MT4P47944 62 aa4.06□□□□□ -1.76
MCM4-202ENST00000517709 UQCR11O14957 56 aa4.04□□□□□ -1.76
MCM4-202ENST00000517709 KRTAP12-3P60328 96 aa4.04□□□□□ -1.76
MCM4-202ENST00000517709 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
MCM4-202ENST00000517709 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
MCM4-202ENST00000517709 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
MCM4-202ENST00000517709 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
MCM4-202ENST00000517709 PSPHP1O15172 72 aa3.94□□□□□ -1.78
MCM4-202ENST00000517709 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
MCM4-202ENST00000517709 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
MCM4-202ENST00000517709 Q1T7F1 81 aa3.88□□□□□ -1.79
MCM4-202ENST00000517709 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
MCM4-202ENST00000517709 V9GYY9 64 aa3.82□□□□□ -1.8
MCM4-202ENST00000517709 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
MCM4-202ENST00000517709 K7ERS5 55 aa3.79□□□□□ -1.8
MCM4-202ENST00000517709 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
MCM4-202ENST00000517709 A6NED7 52 aa3.75□□□□□ -1.81
MCM4-202ENST00000517709 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
MCM4-202ENST00000517709 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
MCM4-202ENST00000517709 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
MCM4-202ENST00000517709 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
MCM4-202ENST00000517709 CDC42SE1Q9NRR8 79 aa3.67□□□□□ -1.82
MCM4-202ENST00000517709 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
MCM4-202ENST00000517709 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
MCM4-202ENST00000517709 ROMO1P60602 79 aa3.63□□□□□ -1.83
MCM4-202ENST00000517709 RPS28P62857 69 aaKnown RBP3.62□□□□□ -1.83
MCM4-202ENST00000517709 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
MCM4-202ENST00000517709 MT1AP04731 61 aa3.58□□□□□ -1.84
MCM4-202ENST00000517709 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
MCM4-202ENST00000517709 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
MCM4-202ENST00000517709 KRTAP5-8O75690 187 aa3.37□□□□□ -1.87
MCM4-202ENST00000517709 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
MCM4-202ENST00000517709 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
MCM4-202ENST00000517709 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
MCM4-202ENST00000517709 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
MCM4-202ENST00000517709 MT3P25713 68 aa3.22□□□□□ -1.89
MCM4-202ENST00000517709 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
MCM4-202ENST00000517709 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
MCM4-202ENST00000517709 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
MCM4-202ENST00000517709 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
MCM4-202ENST00000517709 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
MCM4-202ENST00000517709 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
MCM4-202ENST00000517709 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
MCM4-202ENST00000517709 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
MCM4-202ENST00000517709 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
MCM4-202ENST00000517709 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
MCM4-202ENST00000517709 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
MCM4-202ENST00000517709 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
MCM4-202ENST00000517709 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
MCM4-202ENST00000517709 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
MCM4-202ENST00000517709 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
MCM4-202ENST00000517709 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
MCM4-202ENST00000517709 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
MCM4-202ENST00000517709 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
MCM4-202ENST00000517709 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
MCM4-202ENST00000517709 PRM1P04553 51 aa1.91□□□□□ -2.1
MCM4-202ENST00000517709 INE1O15225 51 aa1.88□□□□□ -2.11
MCM4-202ENST00000517709 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
MCM4-202ENST00000517709 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 182.2 ms