RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 A0A0D9SG42 100 aa2.44□□□□□ -2.02
SCARNA6.1-201ENST00000516989 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
SCARNA6.1-201ENST00000516989 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
SCARNA6.1-201ENST00000516989 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
SCARNA6.1-201ENST00000516989 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
SCARNA6.1-201ENST00000516989 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
SCARNA6.1-201ENST00000516989 A6NED7 52 aa2.4□□□□□ -2.03
SCARNA6.1-201ENST00000516989 MT1XP80297 61 aa2.4□□□□□ -2.03
SCARNA6.1-201ENST00000516989 KRTAP9-6A8MVA2 160 aa2.38□□□□□ -2.03
SCARNA6.1-201ENST00000516989 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
SCARNA6.1-201ENST00000516989 UQCR11O14957 56 aa2.36□□□□□ -2.03
SCARNA6.1-201ENST00000516989 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
SCARNA6.1-201ENST00000516989 RPS28P62857 69 aaKnown RBP2.35□□□□□ -2.03
SCARNA6.1-201ENST00000516989 Q1T7F1 81 aa2.35□□□□□ -2.03
SCARNA6.1-201ENST00000516989 MIR22HGQ0VDD5 57 aa2.33□□□□□ -2.04
SCARNA6.1-201ENST00000516989 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
SCARNA6.1-201ENST00000516989 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
SCARNA6.1-201ENST00000516989 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
SCARNA6.1-201ENST00000516989 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
SCARNA6.1-201ENST00000516989 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
SCARNA6.1-201ENST00000516989 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
SCARNA6.1-201ENST00000516989 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
SCARNA6.1-201ENST00000516989 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
SCARNA6.1-201ENST00000516989 C10orf95Q9H7T3 257 aa2.25□□□□□ -2.05
SCARNA6.1-201ENST00000516989 TNP1P09430 55 aa2.23□□□□□ -2.05
SCARNA6.1-201ENST00000516989 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
SCARNA6.1-201ENST00000516989 SPRR2EP22531 72 aa2.19□□□□□ -2.06
SCARNA6.1-201ENST00000516989 SPRR2BP35325 72 aa2.19□□□□□ -2.06
SCARNA6.1-201ENST00000516989 SPRR2AP35326 72 aa2.19□□□□□ -2.06
SCARNA6.1-201ENST00000516989 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
SCARNA6.1-201ENST00000516989 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
SCARNA6.1-201ENST00000516989 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
SCARNA6.1-201ENST00000516989 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SCARNA6.1-201ENST00000516989 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
SCARNA6.1-201ENST00000516989 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
SCARNA6.1-201ENST00000516989 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
SCARNA6.1-201ENST00000516989 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
SCARNA6.1-201ENST00000516989 ROMO1P60602 79 aa2.13□□□□□ -2.07
SCARNA6.1-201ENST00000516989 MT1EP04732 61 aa2.12□□□□□ -2.07
SCARNA6.1-201ENST00000516989 SPRR2DP22532 72 aa2.11□□□□□ -2.07
SCARNA6.1-201ENST00000516989 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
SCARNA6.1-201ENST00000516989 DSTQ03001 7570 aaKnown RBP2.11□□□□□ -2.07
SCARNA6.1-201ENST00000516989 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
SCARNA6.1-201ENST00000516989 KRTAP19-3Q7Z4W3 81 aa2.09□□□□□ -2.07
SCARNA6.1-201ENST00000516989 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SCARNA6.1-201ENST00000516989 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
SCARNA6.1-201ENST00000516989 MT1GP13640 62 aa2.06□□□□□ -2.08
SCARNA6.1-201ENST00000516989 PP632Q6XCG6 107 aa2.05□□□□□ -2.08
SCARNA6.1-201ENST00000516989 MT1LQ93083 61 aa2.05□□□□□ -2.08
SCARNA6.1-201ENST00000516989 MT1MQ8N339 61 aa2.02□□□□□ -2.09
SCARNA6.1-201ENST00000516989 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
SCARNA6.1-201ENST00000516989 KTN1-AS1Q86SY8 53 aa1.99□□□□□ -2.09
SCARNA6.1-201ENST00000516989 KRTAP4-3Q9BYR4 195 aa1.98□□□□□ -2.09
SCARNA6.1-201ENST00000516989 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
SCARNA6.1-201ENST00000516989 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
SCARNA6.1-201ENST00000516989 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
SCARNA6.1-201ENST00000516989 MT4P47944 62 aa1.85□□□□□ -2.11
SCARNA6.1-201ENST00000516989 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
SCARNA6.1-201ENST00000516989 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
SCARNA6.1-201ENST00000516989 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
SCARNA6.1-201ENST00000516989 MT1AP04731 61 aa1.75□□□□□ -2.13
SCARNA6.1-201ENST00000516989 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
SCARNA6.1-201ENST00000516989 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
SCARNA6.1-201ENST00000516989 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
SCARNA6.1-201ENST00000516989 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
SCARNA6.1-201ENST00000516989 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
SCARNA6.1-201ENST00000516989 OBSCNQ5VST9 7968 aa1.67□□□□□ -2.14
SCARNA6.1-201ENST00000516989 KRTAP6-2Q3LI66 62 aa1.64□□□□□ -2.15
SCARNA6.1-201ENST00000516989 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
SCARNA6.1-201ENST00000516989 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
SCARNA6.1-201ENST00000516989 INE1O15225 51 aa1.52□□□□□ -2.17
SCARNA6.1-201ENST00000516989 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
SCARNA6.1-201ENST00000516989 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
SCARNA6.1-201ENST00000516989 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
SCARNA6.1-201ENST00000516989 PRM1P04553 51 aa1.1□□□□□ -2.23
SCARNA6.1-201ENST00000516989 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
SCARNA6.1-201ENST00000516989 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 83.4 ms