RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
SCARNA16.3-201ENST00000516595 SPATA8Q6RVD6 105 aa0.96□□□□□ -2.26
SCARNA16.3-201ENST00000516595 A0A1B0GU69 56 aa0.95□□□□□ -2.26
SCARNA16.3-201ENST00000516595 KRTAP25-1Q3LHN0 102 aa0.95□□□□□ -2.26
SCARNA16.3-201ENST00000516595 CRCT1Q9UGL9 99 aa0.95□□□□□ -2.26
SCARNA16.3-201ENST00000516595 USH2AO75445 5202 aa0.95□□□□□ -2.26
SCARNA16.3-201ENST00000516595 SSPOA2VEC9 5147 aa0.94□□□□□ -2.26
SCARNA16.3-201ENST00000516595 A0A1B0GU33 70 aa0.94□□□□□ -2.26
SCARNA16.3-201ENST00000516595 K7ERS5 55 aa0.94□□□□□ -2.26
SCARNA16.3-201ENST00000516595 LUZP6Q538Z0 58 aa0.94□□□□□ -2.26
SCARNA16.3-201ENST00000516595 LCE3AQ5TA76 89 aa0.94□□□□□ -2.26
SCARNA16.3-201ENST00000516595 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
SCARNA16.3-201ENST00000516595 UQCR11O14957 56 aa0.93□□□□□ -2.26
SCARNA16.3-201ENST00000516595 KRTAP13-4Q3LI77 160 aa0.93□□□□□ -2.26
SCARNA16.3-201ENST00000516595 PRO2289Q9P1D8 64 aa0.93□□□□□ -2.26
SCARNA16.3-201ENST00000516595 HMCN1Q96RW7 5635 aa0.92□□□□□ -2.26
SCARNA16.3-201ENST00000516595 PP632Q6XCG6 107 aa0.92□□□□□ -2.26
SCARNA16.3-201ENST00000516595 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
SCARNA16.3-201ENST00000516595 FCGBPQ9Y6R7 5405 aaPredicted RBP0.92□□□□□ -2.26
SCARNA16.3-201ENST00000516595 KRTAP12-1P59990 96 aa0.91□□□□□ -2.26
SCARNA16.3-201ENST00000516595 MT1XP80297 61 aa0.91□□□□□ -2.26
SCARNA16.3-201ENST00000516595 LCE3DQ9BYE3 92 aa0.91□□□□□ -2.26
SCARNA16.3-201ENST00000516595 SPRR5A0A1B0GTR4 108 aa0.9□□□□□ -2.27
SCARNA16.3-201ENST00000516595 SPINT4Q6UDR6 99 aa0.9□□□□□ -2.27
SCARNA16.3-201ENST00000516595 A0A0D9SG42 100 aa0.89□□□□□ -2.27
SCARNA16.3-201ENST00000516595 KRTAP6-3Q3LI67 103 aa0.86□□□□□ -2.27
SCARNA16.3-201ENST00000516595 TNP1P09430 55 aa0.85□□□□□ -2.27
SCARNA16.3-201ENST00000516595 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
SCARNA16.3-201ENST00000516595 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
SCARNA16.3-201ENST00000516595 KRTAP8-1Q8IUC2 63 aa0.84□□□□□ -2.27
SCARNA16.3-201ENST00000516595 KMT2DO14686 5537 aa0.83□□□□□ -2.28
SCARNA16.3-201ENST00000516595 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
SCARNA16.3-201ENST00000516595 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
SCARNA16.3-201ENST00000516595 MDN1Q9NU22 5596 aa0.82□□□□□ -2.28
SCARNA16.3-201ENST00000516595 SYNE2Q8WXH0 6885 aaKnown RBP0.82□□□□□ -2.28
SCARNA16.3-201ENST00000516595 MT1EP04732 61 aa0.81□□□□□ -2.28
SCARNA16.3-201ENST00000516595 SPRR2FQ96RM1 72 aa0.81□□□□□ -2.28
SCARNA16.3-201ENST00000516595 KRTAP5-5Q701N2 237 aaPredicted RBP0.8□□□□□ -2.28
SCARNA16.3-201ENST00000516595 SPRR2EP22531 72 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 SPRR2BP35325 72 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 SPRR2AP35326 72 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 KRTAP12-3P60328 96 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 LCE1CQ5T751 118 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 LCE1BQ5T7P3 118 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
SCARNA16.3-201ENST00000516595 MT1GP13640 62 aa0.78□□□□□ -2.28
SCARNA16.3-201ENST00000516595 MT1LQ93083 61 aa0.78□□□□□ -2.28
SCARNA16.3-201ENST00000516595 NEBP20929 6669 aa0.78□□□□□ -2.28
SCARNA16.3-201ENST00000516595 INE1O15225 51 aa0.77□□□□□ -2.29
SCARNA16.3-201ENST00000516595 SPRR2DP22532 72 aa0.76□□□□□ -2.29
SCARNA16.3-201ENST00000516595 MT1MQ8N339 61 aa0.76□□□□□ -2.29
SCARNA16.3-201ENST00000516595 KRTAP2-3P0C7H8 128 aa0.75□□□□□ -2.29
SCARNA16.3-201ENST00000516595 KRTAP20-1Q3LI63 56 aa0.75□□□□□ -2.29
SCARNA16.3-201ENST00000516595 KRTAP2-4Q9BYR9 128 aa0.75□□□□□ -2.29
SCARNA16.3-201ENST00000516595 KRTAP2-1Q9BYU5 128 aa0.74□□□□□ -2.29
SCARNA16.3-201ENST00000516595 MUC19Q7Z5P9 8384 aa0.72□□□□□ -2.29
SCARNA16.3-201ENST00000516595 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
SCARNA16.3-201ENST00000516595 KRTAP12-4P60329 112 aa0.69□□□□□ -2.3
SCARNA16.3-201ENST00000516595 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
SCARNA16.3-201ENST00000516595 MT1AP04731 61 aa0.67□□□□□ -2.3
SCARNA16.3-201ENST00000516595 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
SCARNA16.3-201ENST00000516595 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.31
SCARNA16.3-201ENST00000516595 MT4P47944 62 aa0.64□□□□□ -2.31
SCARNA16.3-201ENST00000516595 KRTAP5-7Q6L8G8 165 aa0.63□□□□□ -2.31
SCARNA16.3-201ENST00000516595 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
SCARNA16.3-201ENST00000516595 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
SCARNA16.3-201ENST00000516595 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
SCARNA16.3-201ENST00000516595 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
SCARNA16.3-201ENST00000516595 KRTAP21-2Q3LI59 83 aa0.54□□□□□ -2.32
SCARNA16.3-201ENST00000516595 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
SCARNA16.3-201ENST00000516595 MUC5ACP98088 5654 aa0.5□□□□□ -2.33
SCARNA16.3-201ENST00000516595 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
SCARNA16.3-201ENST00000516595 PRM1P04553 51 aa0.45□□□□□ -2.34
SCARNA16.3-201ENST00000516595 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
SCARNA16.3-201ENST00000516595 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
SCARNA16.3-201ENST00000516595 MUC16Q8WXI7 14507 aa0.26□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms