RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
TSPAN17-209ENST00000515708 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
TSPAN17-209ENST00000515708 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
TSPAN17-209ENST00000515708 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
TSPAN17-209ENST00000515708 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
TSPAN17-209ENST00000515708 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.54
TSPAN17-209ENST00000515708 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
TSPAN17-209ENST00000515708 MT1GP13640 62 aa5.41□□□□□ -1.54
TSPAN17-209ENST00000515708 MT1MQ8N339 61 aa5.38□□□□□ -1.55
TSPAN17-209ENST00000515708 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
TSPAN17-209ENST00000515708 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
TSPAN17-209ENST00000515708 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
TSPAN17-209ENST00000515708 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
TSPAN17-209ENST00000515708 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
TSPAN17-209ENST00000515708 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
TSPAN17-209ENST00000515708 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
TSPAN17-209ENST00000515708 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
TSPAN17-209ENST00000515708 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
TSPAN17-209ENST00000515708 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
TSPAN17-209ENST00000515708 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
TSPAN17-209ENST00000515708 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
TSPAN17-209ENST00000515708 MT1AP04731 61 aa4.92□□□□□ -1.62
TSPAN17-209ENST00000515708 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
TSPAN17-209ENST00000515708 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.87□□□□□ -1.63
TSPAN17-209ENST00000515708 SPRR2EP22531 72 aa4.86□□□□□ -1.63
TSPAN17-209ENST00000515708 SPRR2BP35325 72 aa4.86□□□□□ -1.63
TSPAN17-209ENST00000515708 SPRR2AP35326 72 aa4.86□□□□□ -1.63
TSPAN17-209ENST00000515708 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
TSPAN17-209ENST00000515708 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
TSPAN17-209ENST00000515708 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
TSPAN17-209ENST00000515708 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
TSPAN17-209ENST00000515708 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
TSPAN17-209ENST00000515708 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
TSPAN17-209ENST00000515708 SPRR2DP22532 72 aa4.66□□□□□ -1.66
TSPAN17-209ENST00000515708 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
TSPAN17-209ENST00000515708 PRM1P04553 51 aa4.59□□□□□ -1.67
TSPAN17-209ENST00000515708 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
TSPAN17-209ENST00000515708 NEBP20929 6669 aa4.53□□□□□ -1.68
TSPAN17-209ENST00000515708 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
TSPAN17-209ENST00000515708 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
TSPAN17-209ENST00000515708 MT3P25713 68 aa4.35□□□□□ -1.71
TSPAN17-209ENST00000515708 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
TSPAN17-209ENST00000515708 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
TSPAN17-209ENST00000515708 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
TSPAN17-209ENST00000515708 MT4P47944 62 aa4.13□□□□□ -1.75
TSPAN17-209ENST00000515708 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
TSPAN17-209ENST00000515708 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
TSPAN17-209ENST00000515708 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
TSPAN17-209ENST00000515708 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
TSPAN17-209ENST00000515708 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
TSPAN17-209ENST00000515708 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
TSPAN17-209ENST00000515708 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
TSPAN17-209ENST00000515708 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
TSPAN17-209ENST00000515708 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
TSPAN17-209ENST00000515708 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
TSPAN17-209ENST00000515708 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
TSPAN17-209ENST00000515708 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
TSPAN17-209ENST00000515708 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
TSPAN17-209ENST00000515708 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
TSPAN17-209ENST00000515708 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
TSPAN17-209ENST00000515708 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
TSPAN17-209ENST00000515708 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
TSPAN17-209ENST00000515708 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
TSPAN17-209ENST00000515708 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
TSPAN17-209ENST00000515708 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
TSPAN17-209ENST00000515708 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
TSPAN17-209ENST00000515708 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
TSPAN17-209ENST00000515708 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
TSPAN17-209ENST00000515708 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
TSPAN17-209ENST00000515708 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
TSPAN17-209ENST00000515708 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
TSPAN17-209ENST00000515708 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
TSPAN17-209ENST00000515708 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
TSPAN17-209ENST00000515708 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
TSPAN17-209ENST00000515708 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
TSPAN17-209ENST00000515708 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
TSPAN17-209ENST00000515708 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 105.4 ms