RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
SNX2-213ENST00000514949 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
SNX2-213ENST00000514949 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
SNX2-213ENST00000514949 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
SNX2-213ENST00000514949 MT1GP13640 62 aa5.72□□□□□ -1.49
SNX2-213ENST00000514949 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
SNX2-213ENST00000514949 MT1MQ8N339 61 aa5.7□□□□□ -1.5
SNX2-213ENST00000514949 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
SNX2-213ENST00000514949 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
SNX2-213ENST00000514949 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
SNX2-213ENST00000514949 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.52
SNX2-213ENST00000514949 LCE5AQ5TCM9 118 aa5.55□□□□□ -1.52
SNX2-213ENST00000514949 MACF1Q9UPN3 7388 aaKnown RBP5.48□□□□□ -1.53
SNX2-213ENST00000514949 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
SNX2-213ENST00000514949 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
SNX2-213ENST00000514949 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
SNX2-213ENST00000514949 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
SNX2-213ENST00000514949 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
SNX2-213ENST00000514949 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
SNX2-213ENST00000514949 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
SNX2-213ENST00000514949 MT1AP04731 61 aa5.17□□□□□ -1.58
SNX2-213ENST00000514949 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.58
SNX2-213ENST00000514949 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
SNX2-213ENST00000514949 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
SNX2-213ENST00000514949 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
SNX2-213ENST00000514949 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
SNX2-213ENST00000514949 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
SNX2-213ENST00000514949 SPRR2EP22531 72 aa5.03□□□□□ -1.6
SNX2-213ENST00000514949 SPRR2BP35325 72 aa5.03□□□□□ -1.6
SNX2-213ENST00000514949 SPRR2AP35326 72 aa5.03□□□□□ -1.6
SNX2-213ENST00000514949 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
SNX2-213ENST00000514949 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
SNX2-213ENST00000514949 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
SNX2-213ENST00000514949 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
SNX2-213ENST00000514949 NEBP20929 6669 aa4.85□□□□□ -1.63
SNX2-213ENST00000514949 SPRR2DP22532 72 aa4.85□□□□□ -1.63
SNX2-213ENST00000514949 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
SNX2-213ENST00000514949 MT3P25713 68 aa4.62□□□□□ -1.67
SNX2-213ENST00000514949 KRTAP6-2Q3LI66 62 aa4.6□□□□□ -1.67
SNX2-213ENST00000514949 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
SNX2-213ENST00000514949 PRM1P04553 51 aa4.58□□□□□ -1.68
SNX2-213ENST00000514949 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
SNX2-213ENST00000514949 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
SNX2-213ENST00000514949 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
SNX2-213ENST00000514949 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
SNX2-213ENST00000514949 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
SNX2-213ENST00000514949 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
SNX2-213ENST00000514949 MT4P47944 62 aa4.22□□□□□ -1.73
SNX2-213ENST00000514949 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
SNX2-213ENST00000514949 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
SNX2-213ENST00000514949 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
SNX2-213ENST00000514949 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
SNX2-213ENST00000514949 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SNX2-213ENST00000514949 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
SNX2-213ENST00000514949 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
SNX2-213ENST00000514949 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
SNX2-213ENST00000514949 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
SNX2-213ENST00000514949 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
SNX2-213ENST00000514949 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.82
SNX2-213ENST00000514949 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.82
SNX2-213ENST00000514949 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
SNX2-213ENST00000514949 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SNX2-213ENST00000514949 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
SNX2-213ENST00000514949 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
SNX2-213ENST00000514949 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
SNX2-213ENST00000514949 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
SNX2-213ENST00000514949 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
SNX2-213ENST00000514949 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
SNX2-213ENST00000514949 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SNX2-213ENST00000514949 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SNX2-213ENST00000514949 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
SNX2-213ENST00000514949 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
SNX2-213ENST00000514949 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SNX2-213ENST00000514949 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SNX2-213ENST00000514949 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
SNX2-213ENST00000514949 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SNX2-213ENST00000514949 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms