RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
UBE2D3-232ENST00000514755 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
UBE2D3-232ENST00000514755 A0A1B0GU69 56 aa4.29□□□□□ -1.72
UBE2D3-232ENST00000514755 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
UBE2D3-232ENST00000514755 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
UBE2D3-232ENST00000514755 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
UBE2D3-232ENST00000514755 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
UBE2D3-232ENST00000514755 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
UBE2D3-232ENST00000514755 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
UBE2D3-232ENST00000514755 TMEM258P61165 79 aa4.19□□□□□ -1.74
UBE2D3-232ENST00000514755 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
UBE2D3-232ENST00000514755 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
UBE2D3-232ENST00000514755 SPRR2DP22532 72 aa4.17□□□□□ -1.74
UBE2D3-232ENST00000514755 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
UBE2D3-232ENST00000514755 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
UBE2D3-232ENST00000514755 MT1EP04732 61 aa4.1□□□□□ -1.75
UBE2D3-232ENST00000514755 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
UBE2D3-232ENST00000514755 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
UBE2D3-232ENST00000514755 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
UBE2D3-232ENST00000514755 UQCR11O14957 56 aa4.03□□□□□ -1.76
UBE2D3-232ENST00000514755 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
UBE2D3-232ENST00000514755 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
UBE2D3-232ENST00000514755 TNP1P09430 55 aa4□□□□□ -1.77
UBE2D3-232ENST00000514755 PSPHP1O15172 72 aa3.96□□□□□ -1.78
UBE2D3-232ENST00000514755 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
UBE2D3-232ENST00000514755 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
UBE2D3-232ENST00000514755 Q1T7F1 81 aa3.94□□□□□ -1.78
UBE2D3-232ENST00000514755 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
UBE2D3-232ENST00000514755 MT1LQ93083 61 aa3.93□□□□□ -1.78
UBE2D3-232ENST00000514755 MT1GP13640 62 aa3.92□□□□□ -1.78
UBE2D3-232ENST00000514755 V9GYY9 64 aa3.91□□□□□ -1.78
UBE2D3-232ENST00000514755 MT1MQ8N339 61 aa3.89□□□□□ -1.79
UBE2D3-232ENST00000514755 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
UBE2D3-232ENST00000514755 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
UBE2D3-232ENST00000514755 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
UBE2D3-232ENST00000514755 K7ERS5 55 aa3.81□□□□□ -1.8
UBE2D3-232ENST00000514755 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
UBE2D3-232ENST00000514755 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
UBE2D3-232ENST00000514755 A6NED7 52 aa3.8□□□□□ -1.8
UBE2D3-232ENST00000514755 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
UBE2D3-232ENST00000514755 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
UBE2D3-232ENST00000514755 MT4P47944 62 aa3.67□□□□□ -1.82
UBE2D3-232ENST00000514755 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
UBE2D3-232ENST00000514755 ROMO1P60602 79 aa3.62□□□□□ -1.83
UBE2D3-232ENST00000514755 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
UBE2D3-232ENST00000514755 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
UBE2D3-232ENST00000514755 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
UBE2D3-232ENST00000514755 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
UBE2D3-232ENST00000514755 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
UBE2D3-232ENST00000514755 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
UBE2D3-232ENST00000514755 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
UBE2D3-232ENST00000514755 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
UBE2D3-232ENST00000514755 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
UBE2D3-232ENST00000514755 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
UBE2D3-232ENST00000514755 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
UBE2D3-232ENST00000514755 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
UBE2D3-232ENST00000514755 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
UBE2D3-232ENST00000514755 MT1AP04731 61 aa3.33□□□□□ -1.88
UBE2D3-232ENST00000514755 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
UBE2D3-232ENST00000514755 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
UBE2D3-232ENST00000514755 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
UBE2D3-232ENST00000514755 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
UBE2D3-232ENST00000514755 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
UBE2D3-232ENST00000514755 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
UBE2D3-232ENST00000514755 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
UBE2D3-232ENST00000514755 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
UBE2D3-232ENST00000514755 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
UBE2D3-232ENST00000514755 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
UBE2D3-232ENST00000514755 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
UBE2D3-232ENST00000514755 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
UBE2D3-232ENST00000514755 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
UBE2D3-232ENST00000514755 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
UBE2D3-232ENST00000514755 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
UBE2D3-232ENST00000514755 PHGR1C9JFL3 82 aa2□□□□□ -2.09
UBE2D3-232ENST00000514755 PRM1P04553 51 aa1.88□□□□□ -2.11
UBE2D3-232ENST00000514755 INE1O15225 51 aa1.63□□□□□ -2.15
UBE2D3-232ENST00000514755 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
UBE2D3-232ENST00000514755 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms