RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 SPRR2EP22531 72 aa5.88□□□□□ -1.47
MATR3-239ENST00000514694 SPRR2BP35325 72 aa5.88□□□□□ -1.47
MATR3-239ENST00000514694 SPRR2AP35326 72 aa5.88□□□□□ -1.47
MATR3-239ENST00000514694 LCE1AQ5T7P2 110 aa5.88□□□□□ -1.47
MATR3-239ENST00000514694 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
MATR3-239ENST00000514694 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
MATR3-239ENST00000514694 A6NED7 52 aa5.76□□□□□ -1.49
MATR3-239ENST00000514694 TNP1P09430 55 aa5.75□□□□□ -1.49
MATR3-239ENST00000514694 MT1EP04732 61 aa5.73□□□□□ -1.49
MATR3-239ENST00000514694 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
MATR3-239ENST00000514694 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
MATR3-239ENST00000514694 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
MATR3-239ENST00000514694 K7ERS5 55 aa5.67□□□□□ -1.5
MATR3-239ENST00000514694 SPRR2DP22532 72 aa5.67□□□□□ -1.5
MATR3-239ENST00000514694 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
MATR3-239ENST00000514694 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
MATR3-239ENST00000514694 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
MATR3-239ENST00000514694 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
MATR3-239ENST00000514694 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
MATR3-239ENST00000514694 MT1LQ93083 61 aa5.52□□□□□ -1.53
MATR3-239ENST00000514694 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
MATR3-239ENST00000514694 MT1GP13640 62 aa5.47□□□□□ -1.53
MATR3-239ENST00000514694 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
MATR3-239ENST00000514694 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
MATR3-239ENST00000514694 MT1MQ8N339 61 aa5.43□□□□□ -1.54
MATR3-239ENST00000514694 ROMO1P60602 79 aa5.41□□□□□ -1.54
MATR3-239ENST00000514694 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.55
MATR3-239ENST00000514694 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
MATR3-239ENST00000514694 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
MATR3-239ENST00000514694 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
MATR3-239ENST00000514694 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
MATR3-239ENST00000514694 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.06□□□□□ -1.6
MATR3-239ENST00000514694 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
MATR3-239ENST00000514694 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
MATR3-239ENST00000514694 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
MATR3-239ENST00000514694 MT4P47944 62 aa4.97□□□□□ -1.61
MATR3-239ENST00000514694 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.61
MATR3-239ENST00000514694 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
MATR3-239ENST00000514694 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
MATR3-239ENST00000514694 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
MATR3-239ENST00000514694 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
MATR3-239ENST00000514694 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
MATR3-239ENST00000514694 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
MATR3-239ENST00000514694 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
MATR3-239ENST00000514694 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
MATR3-239ENST00000514694 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
MATR3-239ENST00000514694 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
MATR3-239ENST00000514694 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
MATR3-239ENST00000514694 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
MATR3-239ENST00000514694 MT1AP04731 61 aa4.67□□□□□ -1.66
MATR3-239ENST00000514694 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
MATR3-239ENST00000514694 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
MATR3-239ENST00000514694 KTN1-AS1Q86SY8 53 aa4.51□□□□□ -1.69
MATR3-239ENST00000514694 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
MATR3-239ENST00000514694 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
MATR3-239ENST00000514694 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
MATR3-239ENST00000514694 MT3P25713 68 aa4.39□□□□□ -1.71
MATR3-239ENST00000514694 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
MATR3-239ENST00000514694 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
MATR3-239ENST00000514694 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
MATR3-239ENST00000514694 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
MATR3-239ENST00000514694 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
MATR3-239ENST00000514694 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
MATR3-239ENST00000514694 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
MATR3-239ENST00000514694 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
MATR3-239ENST00000514694 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
MATR3-239ENST00000514694 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
MATR3-239ENST00000514694 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
MATR3-239ENST00000514694 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
MATR3-239ENST00000514694 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
MATR3-239ENST00000514694 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
MATR3-239ENST00000514694 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
MATR3-239ENST00000514694 PRM1P04553 51 aa2.81□□□□□ -1.96
MATR3-239ENST00000514694 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
MATR3-239ENST00000514694 INE1O15225 51 aa2.69□□□□□ -1.98
MATR3-239ENST00000514694 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
MATR3-239ENST00000514694 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
MATR3-239ENST00000514694 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms