RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 A0A1B0GU33 70 aa4.82□□□□□ -1.64
PFDN1-206ENST00000514611 MT1GP13640 62 aa4.79□□□□□ -1.64
PFDN1-206ENST00000514611 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
PFDN1-206ENST00000514611 MT1MQ8N339 61 aa4.76□□□□□ -1.65
PFDN1-206ENST00000514611 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
PFDN1-206ENST00000514611 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
PFDN1-206ENST00000514611 MT1LQ93083 61 aa4.73□□□□□ -1.65
PFDN1-206ENST00000514611 MT4P47944 62 aa4.71□□□□□ -1.66
PFDN1-206ENST00000514611 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
PFDN1-206ENST00000514611 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
PFDN1-206ENST00000514611 A8MU10 97 aa4.7□□□□□ -1.66
PFDN1-206ENST00000514611 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
PFDN1-206ENST00000514611 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
PFDN1-206ENST00000514611 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
PFDN1-206ENST00000514611 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
PFDN1-206ENST00000514611 SMIM26A0A096LP01 95 aa4.67□□□□□ -1.66
PFDN1-206ENST00000514611 A0A1B0GU69 56 aa4.67□□□□□ -1.66
PFDN1-206ENST00000514611 PRR15LQ9BU68 103 aa4.65□□□□□ -1.67
PFDN1-206ENST00000514611 V9GYY9 64 aa4.65□□□□□ -1.67
PFDN1-206ENST00000514611 Q1T7F1 81 aa4.62□□□□□ -1.67
PFDN1-206ENST00000514611 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
PFDN1-206ENST00000514611 TNP1P09430 55 aa4.61□□□□□ -1.67
PFDN1-206ENST00000514611 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
PFDN1-206ENST00000514611 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
PFDN1-206ENST00000514611 PSPHP1O15172 72 aa4.54□□□□□ -1.68
PFDN1-206ENST00000514611 UQCR11O14957 56 aa4.49□□□□□ -1.69
PFDN1-206ENST00000514611 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
PFDN1-206ENST00000514611 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
PFDN1-206ENST00000514611 A6NED7 52 aa4.42□□□□□ -1.7
PFDN1-206ENST00000514611 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
PFDN1-206ENST00000514611 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
PFDN1-206ENST00000514611 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
PFDN1-206ENST00000514611 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
PFDN1-206ENST00000514611 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
PFDN1-206ENST00000514611 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
PFDN1-206ENST00000514611 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
PFDN1-206ENST00000514611 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
PFDN1-206ENST00000514611 K7ERS5 55 aa4.28□□□□□ -1.72
PFDN1-206ENST00000514611 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
PFDN1-206ENST00000514611 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
PFDN1-206ENST00000514611 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
PFDN1-206ENST00000514611 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
PFDN1-206ENST00000514611 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
PFDN1-206ENST00000514611 ROMO1P60602 79 aa4.05□□□□□ -1.76
PFDN1-206ENST00000514611 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
PFDN1-206ENST00000514611 MT1AP04731 61 aa4.02□□□□□ -1.77
PFDN1-206ENST00000514611 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
PFDN1-206ENST00000514611 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
PFDN1-206ENST00000514611 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
PFDN1-206ENST00000514611 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
PFDN1-206ENST00000514611 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
PFDN1-206ENST00000514611 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
PFDN1-206ENST00000514611 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
PFDN1-206ENST00000514611 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
PFDN1-206ENST00000514611 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
PFDN1-206ENST00000514611 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
PFDN1-206ENST00000514611 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
PFDN1-206ENST00000514611 MT3P25713 68 aa3.75□□□□□ -1.81
PFDN1-206ENST00000514611 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
PFDN1-206ENST00000514611 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
PFDN1-206ENST00000514611 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
PFDN1-206ENST00000514611 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
PFDN1-206ENST00000514611 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
PFDN1-206ENST00000514611 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
PFDN1-206ENST00000514611 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
PFDN1-206ENST00000514611 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
PFDN1-206ENST00000514611 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
PFDN1-206ENST00000514611 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
PFDN1-206ENST00000514611 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
PFDN1-206ENST00000514611 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
PFDN1-206ENST00000514611 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
PFDN1-206ENST00000514611 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
PFDN1-206ENST00000514611 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
PFDN1-206ENST00000514611 INE1O15225 51 aa2.39□□□□□ -2.03
PFDN1-206ENST00000514611 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
PFDN1-206ENST00000514611 PRM1P04553 51 aa2.09□□□□□ -2.07
PFDN1-206ENST00000514611 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
PFDN1-206ENST00000514611 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms