RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PRR15LQ9BU68 103 aa3.67□□□□□ -1.82
HMGXB3-205ENST00000514469 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
HMGXB3-205ENST00000514469 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
HMGXB3-205ENST00000514469 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
HMGXB3-205ENST00000514469 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
HMGXB3-205ENST00000514469 MT4P47944 62 aa3.6□□□□□ -1.83
HMGXB3-205ENST00000514469 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
HMGXB3-205ENST00000514469 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
HMGXB3-205ENST00000514469 TMEM258P61165 79 aa3.56□□□□□ -1.84
HMGXB3-205ENST00000514469 UQCR11O14957 56 aa3.55□□□□□ -1.84
HMGXB3-205ENST00000514469 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
HMGXB3-205ENST00000514469 H3BS24 57 aa3.52□□□□□ -1.85
HMGXB3-205ENST00000514469 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
HMGXB3-205ENST00000514469 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
HMGXB3-205ENST00000514469 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
HMGXB3-205ENST00000514469 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
HMGXB3-205ENST00000514469 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
HMGXB3-205ENST00000514469 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
HMGXB3-205ENST00000514469 K7ERS5 55 aa3.39□□□□□ -1.87
HMGXB3-205ENST00000514469 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
HMGXB3-205ENST00000514469 V9GYY9 64 aa3.37□□□□□ -1.87
HMGXB3-205ENST00000514469 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
HMGXB3-205ENST00000514469 PSPHP1O15172 72 aa3.36□□□□□ -1.87
HMGXB3-205ENST00000514469 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
HMGXB3-205ENST00000514469 Q1T7F1 81 aa3.35□□□□□ -1.87
HMGXB3-205ENST00000514469 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.87
HMGXB3-205ENST00000514469 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
HMGXB3-205ENST00000514469 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
HMGXB3-205ENST00000514469 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
HMGXB3-205ENST00000514469 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
HMGXB3-205ENST00000514469 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
HMGXB3-205ENST00000514469 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
HMGXB3-205ENST00000514469 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
HMGXB3-205ENST00000514469 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
HMGXB3-205ENST00000514469 A6NED7 52 aa3.24□□□□□ -1.89
HMGXB3-205ENST00000514469 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
HMGXB3-205ENST00000514469 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
HMGXB3-205ENST00000514469 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
HMGXB3-205ENST00000514469 MT1AP04731 61 aa3.17□□□□□ -1.9
HMGXB3-205ENST00000514469 ROMO1P60602 79 aa3.17□□□□□ -1.9
HMGXB3-205ENST00000514469 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
HMGXB3-205ENST00000514469 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
HMGXB3-205ENST00000514469 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
HMGXB3-205ENST00000514469 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
HMGXB3-205ENST00000514469 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
HMGXB3-205ENST00000514469 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
HMGXB3-205ENST00000514469 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
HMGXB3-205ENST00000514469 KRTAP5-8O75690 187 aa3□□□□□ -1.93
HMGXB3-205ENST00000514469 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
HMGXB3-205ENST00000514469 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
HMGXB3-205ENST00000514469 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
HMGXB3-205ENST00000514469 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
HMGXB3-205ENST00000514469 MT3P25713 68 aa2.89□□□□□ -1.95
HMGXB3-205ENST00000514469 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
HMGXB3-205ENST00000514469 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
HMGXB3-205ENST00000514469 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
HMGXB3-205ENST00000514469 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
HMGXB3-205ENST00000514469 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
HMGXB3-205ENST00000514469 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
HMGXB3-205ENST00000514469 LUZP6Q538Z0 58 aa2.54□□□□□ -2
HMGXB3-205ENST00000514469 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
HMGXB3-205ENST00000514469 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
HMGXB3-205ENST00000514469 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
HMGXB3-205ENST00000514469 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
HMGXB3-205ENST00000514469 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
HMGXB3-205ENST00000514469 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
HMGXB3-205ENST00000514469 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
HMGXB3-205ENST00000514469 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
HMGXB3-205ENST00000514469 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
HMGXB3-205ENST00000514469 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
HMGXB3-205ENST00000514469 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
HMGXB3-205ENST00000514469 INE1O15225 51 aa2.06□□□□□ -2.08
HMGXB3-205ENST00000514469 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
HMGXB3-205ENST00000514469 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
HMGXB3-205ENST00000514469 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
HMGXB3-205ENST00000514469 PRM1P04553 51 aa1.62□□□□□ -2.15
HMGXB3-205ENST00000514469 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
HMGXB3-205ENST00000514469 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 384.4 ms