RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
NEDD9-214ENST00000513989 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
NEDD9-214ENST00000513989 TNP1P09430 55 aa4.05□□□□□ -1.76
NEDD9-214ENST00000513989 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
NEDD9-214ENST00000513989 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
NEDD9-214ENST00000513989 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
NEDD9-214ENST00000513989 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
NEDD9-214ENST00000513989 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
NEDD9-214ENST00000513989 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
NEDD9-214ENST00000513989 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
NEDD9-214ENST00000513989 SPRR2EP22531 72 aa3.98□□□□□ -1.77
NEDD9-214ENST00000513989 SPRR2BP35325 72 aa3.98□□□□□ -1.77
NEDD9-214ENST00000513989 SPRR2AP35326 72 aa3.98□□□□□ -1.77
NEDD9-214ENST00000513989 ROMO1P60602 79 aa3.98□□□□□ -1.77
NEDD9-214ENST00000513989 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
NEDD9-214ENST00000513989 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
NEDD9-214ENST00000513989 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
NEDD9-214ENST00000513989 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
NEDD9-214ENST00000513989 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
NEDD9-214ENST00000513989 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
NEDD9-214ENST00000513989 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
NEDD9-214ENST00000513989 SPRR2DP22532 72 aa3.84□□□□□ -1.79
NEDD9-214ENST00000513989 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
NEDD9-214ENST00000513989 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
NEDD9-214ENST00000513989 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
NEDD9-214ENST00000513989 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
NEDD9-214ENST00000513989 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
NEDD9-214ENST00000513989 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
NEDD9-214ENST00000513989 MT1EP04732 61 aa3.72□□□□□ -1.81
NEDD9-214ENST00000513989 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
NEDD9-214ENST00000513989 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
NEDD9-214ENST00000513989 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
NEDD9-214ENST00000513989 MT1GP13640 62 aa3.63□□□□□ -1.83
NEDD9-214ENST00000513989 MT1LQ93083 61 aa3.61□□□□□ -1.83
NEDD9-214ENST00000513989 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
NEDD9-214ENST00000513989 MT1MQ8N339 61 aa3.52□□□□□ -1.85
NEDD9-214ENST00000513989 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
NEDD9-214ENST00000513989 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
NEDD9-214ENST00000513989 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
NEDD9-214ENST00000513989 MT4P47944 62 aa3.39□□□□□ -1.87
NEDD9-214ENST00000513989 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
NEDD9-214ENST00000513989 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
NEDD9-214ENST00000513989 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
NEDD9-214ENST00000513989 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
NEDD9-214ENST00000513989 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
NEDD9-214ENST00000513989 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
NEDD9-214ENST00000513989 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
NEDD9-214ENST00000513989 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
NEDD9-214ENST00000513989 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
NEDD9-214ENST00000513989 INE1O15225 51 aa3.15□□□□□ -1.91
NEDD9-214ENST00000513989 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
NEDD9-214ENST00000513989 MT3P25713 68 aa3.11□□□□□ -1.91
NEDD9-214ENST00000513989 MT1AP04731 61 aa3.08□□□□□ -1.92
NEDD9-214ENST00000513989 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
NEDD9-214ENST00000513989 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
NEDD9-214ENST00000513989 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
NEDD9-214ENST00000513989 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
NEDD9-214ENST00000513989 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
NEDD9-214ENST00000513989 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
NEDD9-214ENST00000513989 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
NEDD9-214ENST00000513989 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
NEDD9-214ENST00000513989 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
NEDD9-214ENST00000513989 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
NEDD9-214ENST00000513989 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
NEDD9-214ENST00000513989 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
NEDD9-214ENST00000513989 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
NEDD9-214ENST00000513989 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
NEDD9-214ENST00000513989 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
NEDD9-214ENST00000513989 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
NEDD9-214ENST00000513989 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
NEDD9-214ENST00000513989 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NEDD9-214ENST00000513989 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
NEDD9-214ENST00000513989 PRM1P04553 51 aa2.03□□□□□ -2.08
NEDD9-214ENST00000513989 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NEDD9-214ENST00000513989 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
NEDD9-214ENST00000513989 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
NEDD9-214ENST00000513989 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
NEDD9-214ENST00000513989 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms