RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 A6NED7 52 aa4.79□□□□□ -1.64
TRIM23-207ENST00000513794 A0A0D9SG42 100 aa4.77□□□□□ -1.65
TRIM23-207ENST00000513794 K7ERS5 55 aa4.77□□□□□ -1.65
TRIM23-207ENST00000513794 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
TRIM23-207ENST00000513794 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
TRIM23-207ENST00000513794 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
TRIM23-207ENST00000513794 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
TRIM23-207ENST00000513794 KRTAP8-1Q8IUC2 63 aa4.71□□□□□ -1.66
TRIM23-207ENST00000513794 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
TRIM23-207ENST00000513794 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
TRIM23-207ENST00000513794 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
TRIM23-207ENST00000513794 A8MU10 97 aa4.68□□□□□ -1.66
TRIM23-207ENST00000513794 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
TRIM23-207ENST00000513794 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
TRIM23-207ENST00000513794 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
TRIM23-207ENST00000513794 SPRR2EP22531 72 aa4.61□□□□□ -1.67
TRIM23-207ENST00000513794 SPRR2BP35325 72 aa4.61□□□□□ -1.67
TRIM23-207ENST00000513794 SPRR2AP35326 72 aa4.61□□□□□ -1.67
TRIM23-207ENST00000513794 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
TRIM23-207ENST00000513794 TNP1P09430 55 aa4.48□□□□□ -1.69
TRIM23-207ENST00000513794 SPRR2DP22532 72 aa4.45□□□□□ -1.7
TRIM23-207ENST00000513794 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
TRIM23-207ENST00000513794 C10orf95Q9H7T3 257 aa4.42□□□□□ -1.7
TRIM23-207ENST00000513794 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
TRIM23-207ENST00000513794 ROMO1P60602 79 aa4.41□□□□□ -1.7
TRIM23-207ENST00000513794 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
TRIM23-207ENST00000513794 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
TRIM23-207ENST00000513794 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
TRIM23-207ENST00000513794 MT1EP04732 61 aa4.32□□□□□ -1.72
TRIM23-207ENST00000513794 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
TRIM23-207ENST00000513794 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
TRIM23-207ENST00000513794 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
TRIM23-207ENST00000513794 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
TRIM23-207ENST00000513794 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
TRIM23-207ENST00000513794 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
TRIM23-207ENST00000513794 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
TRIM23-207ENST00000513794 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
TRIM23-207ENST00000513794 MT1GP13640 62 aa4.2□□□□□ -1.74
TRIM23-207ENST00000513794 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
TRIM23-207ENST00000513794 MT1LQ93083 61 aa4.15□□□□□ -1.75
TRIM23-207ENST00000513794 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
TRIM23-207ENST00000513794 MT1MQ8N339 61 aa4.11□□□□□ -1.75
TRIM23-207ENST00000513794 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
TRIM23-207ENST00000513794 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
TRIM23-207ENST00000513794 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
TRIM23-207ENST00000513794 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
TRIM23-207ENST00000513794 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
TRIM23-207ENST00000513794 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
TRIM23-207ENST00000513794 MT4P47944 62 aa3.96□□□□□ -1.78
TRIM23-207ENST00000513794 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
TRIM23-207ENST00000513794 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
TRIM23-207ENST00000513794 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
TRIM23-207ENST00000513794 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
TRIM23-207ENST00000513794 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
TRIM23-207ENST00000513794 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
TRIM23-207ENST00000513794 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
TRIM23-207ENST00000513794 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
TRIM23-207ENST00000513794 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
TRIM23-207ENST00000513794 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
TRIM23-207ENST00000513794 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
TRIM23-207ENST00000513794 MT1AP04731 61 aa3.54□□□□□ -1.84
TRIM23-207ENST00000513794 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
TRIM23-207ENST00000513794 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
TRIM23-207ENST00000513794 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
TRIM23-207ENST00000513794 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
TRIM23-207ENST00000513794 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
TRIM23-207ENST00000513794 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
TRIM23-207ENST00000513794 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
TRIM23-207ENST00000513794 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
TRIM23-207ENST00000513794 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
TRIM23-207ENST00000513794 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
TRIM23-207ENST00000513794 INE1O15225 51 aa2.65□□□□□ -1.99
TRIM23-207ENST00000513794 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
TRIM23-207ENST00000513794 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
TRIM23-207ENST00000513794 PRM1P04553 51 aa2.21□□□□□ -2.06
TRIM23-207ENST00000513794 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
TRIM23-207ENST00000513794 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TRIM23-207ENST00000513794 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 119.9 ms