RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 SPRR2AP35326 72 aa3.86□□□□□ -1.79
PABPC4-218ENST00000513632 PLAC4Q8WY50 150 aa3.86□□□□□ -1.79
PABPC4-218ENST00000513632 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
PABPC4-218ENST00000513632 UQCR11O14957 56 aa3.84□□□□□ -1.79
PABPC4-218ENST00000513632 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
PABPC4-218ENST00000513632 H0Y9P7 68 aa3.81□□□□□ -1.8
PABPC4-218ENST00000513632 MT1XP80297 61 aa3.79□□□□□ -1.8
PABPC4-218ENST00000513632 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
PABPC4-218ENST00000513632 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
PABPC4-218ENST00000513632 LINC00208Q96KT6 92 aa3.78□□□□□ -1.8
PABPC4-218ENST00000513632 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
PABPC4-218ENST00000513632 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
PABPC4-218ENST00000513632 SPRR2DP22532 72 aa3.74□□□□□ -1.81
PABPC4-218ENST00000513632 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
PABPC4-218ENST00000513632 M0QZ58 72 aa3.73□□□□□ -1.81
PABPC4-218ENST00000513632 INE1O15225 51 aa3.63□□□□□ -1.83
PABPC4-218ENST00000513632 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
PABPC4-218ENST00000513632 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
PABPC4-218ENST00000513632 ACYP2P14621 99 aa3.6□□□□□ -1.83
PABPC4-218ENST00000513632 COA5Q86WW8 74 aa3.58□□□□□ -1.84
PABPC4-218ENST00000513632 A0A1B0GU69 56 aa3.56□□□□□ -1.84
PABPC4-218ENST00000513632 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
PABPC4-218ENST00000513632 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
PABPC4-218ENST00000513632 MT1EP04732 61 aa3.38□□□□□ -1.87
PABPC4-218ENST00000513632 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
PABPC4-218ENST00000513632 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
PABPC4-218ENST00000513632 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
PABPC4-218ENST00000513632 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
PABPC4-218ENST00000513632 A0A0D9SG42 100 aa3.33□□□□□ -1.88
PABPC4-218ENST00000513632 MT1GP13640 62 aa3.33□□□□□ -1.88
PABPC4-218ENST00000513632 MT3P25713 68 aa3.28□□□□□ -1.88
PABPC4-218ENST00000513632 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
PABPC4-218ENST00000513632 MT4P47944 62 aa3.27□□□□□ -1.89
PABPC4-218ENST00000513632 MT1MQ8N339 61 aa3.22□□□□□ -1.89
PABPC4-218ENST00000513632 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
PABPC4-218ENST00000513632 MT1LQ93083 61 aa3.2□□□□□ -1.9
PABPC4-218ENST00000513632 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PABPC4-218ENST00000513632 TNP1P09430 55 aa3.16□□□□□ -1.9
PABPC4-218ENST00000513632 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
PABPC4-218ENST00000513632 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
PABPC4-218ENST00000513632 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
PABPC4-218ENST00000513632 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
PABPC4-218ENST00000513632 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
PABPC4-218ENST00000513632 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PABPC4-218ENST00000513632 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
PABPC4-218ENST00000513632 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
PABPC4-218ENST00000513632 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
PABPC4-218ENST00000513632 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
PABPC4-218ENST00000513632 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
PABPC4-218ENST00000513632 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
PABPC4-218ENST00000513632 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PABPC4-218ENST00000513632 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
PABPC4-218ENST00000513632 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
PABPC4-218ENST00000513632 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
PABPC4-218ENST00000513632 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
PABPC4-218ENST00000513632 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
PABPC4-218ENST00000513632 MT1AP04731 61 aa2.73□□□□□ -1.97
PABPC4-218ENST00000513632 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
PABPC4-218ENST00000513632 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
PABPC4-218ENST00000513632 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
PABPC4-218ENST00000513632 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
PABPC4-218ENST00000513632 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
PABPC4-218ENST00000513632 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
PABPC4-218ENST00000513632 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
PABPC4-218ENST00000513632 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
PABPC4-218ENST00000513632 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
PABPC4-218ENST00000513632 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
PABPC4-218ENST00000513632 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
PABPC4-218ENST00000513632 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
PABPC4-218ENST00000513632 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PABPC4-218ENST00000513632 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
PABPC4-218ENST00000513632 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
PABPC4-218ENST00000513632 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
PABPC4-218ENST00000513632 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
PABPC4-218ENST00000513632 PRM1P04553 51 aa1.76□□□□□ -2.13
PABPC4-218ENST00000513632 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
PABPC4-218ENST00000513632 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
PABPC4-218ENST00000513632 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 101.8 ms