RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	LCE1A	Q5T7P2	110 aa		5.78	□□□□□ -1.48
SH3TC1-223	ENST00000513495	KRTAP12-3	P60328	96 aa		5.75	□□□□□ -1.49
SH3TC1-223	ENST00000513495	PRO0628	Q9UI54	55 aa		5.74	□□□□□ -1.49
SH3TC1-223	ENST00000513495	KRTAP2-3	P0C7H8	128 aa		5.68	□□□□□ -1.5
SH3TC1-223	ENST00000513495	KRTAP19-3	Q7Z4W3	81 aa		5.68	□□□□□ -1.5
SH3TC1-223	ENST00000513495	KRTAP2-4	Q9BYR9	128 aa		5.68	□□□□□ -1.5
SH3TC1-223	ENST00000513495	SPRR2D	P22532	72 aa		5.66	□□□□□ -1.5
SH3TC1-223	ENST00000513495	MT1G	P13640	62 aa		5.61	□□□□□ -1.51
SH3TC1-223	ENST00000513495	LCE5A	Q5TCM9	118 aa		5.61	□□□□□ -1.51
SH3TC1-223	ENST00000513495	MT1L	Q93083	61 aa		5.61	□□□□□ -1.51
SH3TC1-223	ENST00000513495	KRTAP15-1	Q3LI76	137 aa		5.53	□□□□□ -1.52
SH3TC1-223	ENST00000513495	KRTAP19-4	Q3LI73	84 aa		5.51	□□□□□ -1.53
SH3TC1-223	ENST00000513495	KRTAP2-2	Q9BYT5	123 aa		5.5	□□□□□ -1.53
SH3TC1-223	ENST00000513495	KRTAP2-1	Q9BYU5	128 aa		5.5	□□□□□ -1.53
SH3TC1-223	ENST00000513495	MT1M	Q8N339	61 aa		5.49	□□□□□ -1.53
SH3TC1-223	ENST00000513495	LCE3B	Q5TA77	95 aa		5.46	□□□□□ -1.54
SH3TC1-223	ENST00000513495	KTN1-AS1	Q86SY8	53 aa		5.38	□□□□□ -1.55
SH3TC1-223	ENST00000513495	PRAC1	Q96KF2	57 aa		5.38	□□□□□ -1.55
SH3TC1-223	ENST00000513495	LCE3C	Q5T5A8	94 aa		5.33	□□□□□ -1.56
SH3TC1-223	ENST00000513495	KRTAP4-7	Q9BYR0	210 aa		5.32	□□□□□ -1.56
SH3TC1-223	ENST00000513495	KRTAP4-3	Q9BYR4	195 aa		5.3	□□□□□ -1.56
SH3TC1-223	ENST00000513495	DST	Q03001	7570 aa	Known RBP	5.25	□□□□□ -1.57
SH3TC1-223	ENST00000513495	SVIP	Q8NHG7	77 aa		5.16	□□□□□ -1.58
SH3TC1-223	ENST00000513495	LCE4A	Q5TA78	99 aa		5.03	□□□□□ -1.6
SH3TC1-223	ENST00000513495	LOC100996750	A0A140TA64	210 aa		5.02	□□□□□ -1.61
SH3TC1-223	ENST00000513495	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.96	□□□□□ -1.62
SH3TC1-223	ENST00000513495	KRTAP4-9	Q9BYQ8	210 aa		4.96	□□□□□ -1.62
SH3TC1-223	ENST00000513495	KRTAP5-4	Q6L8H1	288 aa		4.95	□□□□□ -1.62
SH3TC1-223	ENST00000513495	KRTAP9-6	A8MVA2	160 aa		4.93	□□□□□ -1.62
SH3TC1-223	ENST00000513495	MT4	P47944	62 aa		4.89	□□□□□ -1.63
SH3TC1-223	ENST00000513495	LCE1D	Q5T752	114 aa		4.88	□□□□□ -1.63
SH3TC1-223	ENST00000513495	GPR98	Q8WXG9	6306 aa		4.87	□□□□□ -1.63
SH3TC1-223	ENST00000513495	KRTAP12-4	P60329	112 aa		4.83	□□□□□ -1.64
SH3TC1-223	ENST00000513495	SPRR5	A0A1B0GTR4	108 aa		4.82	□□□□□ -1.64
SH3TC1-223	ENST00000513495	MT1A	P04731	61 aa		4.8	□□□□□ -1.64
SH3TC1-223	ENST00000513495	HMCN1	Q96RW7	5635 aa		4.8	□□□□□ -1.64
SH3TC1-223	ENST00000513495	KRTAP4-6	Q9BYQ5	205 aa		4.75	□□□□□ -1.65
SH3TC1-223	ENST00000513495	KRTAP6-1	Q3LI64	71 aa		4.71	□□□□□ -1.66
SH3TC1-223	ENST00000513495	KRTAP20-2	Q3LI61	65 aa		4.66	□□□□□ -1.66
SH3TC1-223	ENST00000513495	LUZP6	Q538Z0	58 aa		4.61	□□□□□ -1.67
SH3TC1-223	ENST00000513495	AHNAK2	Q8IVF2	5795 aa		4.59	□□□□□ -1.67
SH3TC1-223	ENST00000513495	KRTAP9-4	Q9BYQ2	154 aa		4.59	□□□□□ -1.67
SH3TC1-223	ENST00000513495	SYNE1	Q8NF91	8797 aa	Known RBP	4.59	□□□□□ -1.67
SH3TC1-223	ENST00000513495	KRTAP5-10	Q6L8G5	202 aa		4.49	□□□□□ -1.69
SH3TC1-223	ENST00000513495	KRTAP5-3	Q6L8H2	238 aa		4.48	□□□□□ -1.69
SH3TC1-223	ENST00000513495	KRTAP6-2	Q3LI66	62 aa		4.43	□□□□□ -1.7
SH3TC1-223	ENST00000513495	MT3	P25713	68 aa		4.41	□□□□□ -1.7
SH3TC1-223	ENST00000513495	KRTAP5-2	Q701N4	177 aa		4.41	□□□□□ -1.7
SH3TC1-223	ENST00000513495	KRTAP5-7	Q6L8G8	165 aa		4.34	□□□□□ -1.71
SH3TC1-223	ENST00000513495	KRTAP4-11	Q9BYQ6	195 aa		4.16	□□□□□ -1.74
SH3TC1-223	ENST00000513495	NDUFAF8	A1L188	74 aa		4.08	□□□□□ -1.76
SH3TC1-223	ENST00000513495	OBSCN	Q5VST9	7968 aa		4.03	□□□□□ -1.76
SH3TC1-223	ENST00000513495	KRTAP5-8	O75690	187 aa		3.98	□□□□□ -1.77
SH3TC1-223	ENST00000513495	LCE3D	Q9BYE3	92 aa		3.95	□□□□□ -1.78
SH3TC1-223	ENST00000513495	LCE1E	Q5T753	118 aa		3.92	□□□□□ -1.78
SH3TC1-223	ENST00000513495	KRTAP5-1	Q6L8H4	278 aa		3.86	□□□□□ -1.79
SH3TC1-223	ENST00000513495	KRTAP9-9	Q9BYP9	154 aa		3.85	□□□□□ -1.79
SH3TC1-223	ENST00000513495	LCE3E	Q5T5B0	92 aa		3.8	□□□□□ -1.8
SH3TC1-223	ENST00000513495	MUC5AC	P98088	5654 aa		3.78	□□□□□ -1.8
SH3TC1-223	ENST00000513495	AHNAK	Q09666	5890 aa	Known RBP	3.78	□□□□□ -1.8
SH3TC1-223	ENST00000513495	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.77	□□□□□ -1.81
SH3TC1-223	ENST00000513495	LCE1B	Q5T7P3	118 aa		3.67	□□□□□ -1.82
SH3TC1-223	ENST00000513495	LCE1C	Q5T751	118 aa		3.63	□□□□□ -1.83
SH3TC1-223	ENST00000513495	KRTAP4-2	Q9BYR5	136 aa		3.6	□□□□□ -1.83
SH3TC1-223	ENST00000513495		A0A0A0MQY5	61 aa		3.56	□□□□□ -1.84
SH3TC1-223	ENST00000513495	INE1	O15225	51 aa		3.41	□□□□□ -1.86
SH3TC1-223	ENST00000513495	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.34	□□□□□ -1.87
SH3TC1-223	ENST00000513495	KRTAP5-11	Q6L8G4	156 aa		3.24	□□□□□ -1.89
SH3TC1-223	ENST00000513495	KRTAP4-12	Q9BQ66	201 aa		3.12	□□□□□ -1.91
SH3TC1-223	ENST00000513495	KRTAP21-2	Q3LI59	83 aa		3.09	□□□□□ -1.91
SH3TC1-223	ENST00000513495	PRM1	P04553	51 aa		3.08	□□□□□ -1.92
SH3TC1-223	ENST00000513495	LCE1F	Q5T754	118 aa		3.07	□□□□□ -1.92
SH3TC1-223	ENST00000513495	PHGR1	C9JFL3	82 aa		2.78	□□□□□ -1.96
SH3TC1-223	ENST00000513495		H3BS24	57 aa		2.78	□□□□□ -1.96
SH3TC1-223	ENST00000513495	KRTAP4-4	Q9BYR3	166 aa		2.77	□□□□□ -1.97
SH3TC1-223	ENST00000513495	MUC19	Q7Z5P9	8384 aa		2.47	□□□□□ -2.01
SH3TC1-223	ENST00000513495	KRTAP21-1	Q3LI58	79 aa		2.05	□□□□□ -2.08
SH3TC1-223	ENST00000513495	MUC16	Q8WXI7	14507 aa		1.74	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms