RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	RPS28	P62857	69 aa	Known RBP	4.42	□□□□□ -1.7
UBE2D3-231	ENST00000513098	KRTAP4-12	Q9BQ66	201 aa		4.4	□□□□□ -1.71
UBE2D3-231	ENST00000513098		A8MU10	97 aa		4.38	□□□□□ -1.71
UBE2D3-231	ENST00000513098	TNP1	P09430	55 aa		4.38	□□□□□ -1.71
UBE2D3-231	ENST00000513098	C10orf95	Q9H7T3	257 aa		4.38	□□□□□ -1.71
UBE2D3-231	ENST00000513098	LCE3A	Q5TA76	89 aa		4.37	□□□□□ -1.71
UBE2D3-231	ENST00000513098	KRTAP5-4	Q6L8H1	288 aa		4.37	□□□□□ -1.71
UBE2D3-231	ENST00000513098	MT4	P47944	62 aa		4.35	□□□□□ -1.71
UBE2D3-231	ENST00000513098	AHNAK2	Q8IVF2	5795 aa		4.33	□□□□□ -1.72
UBE2D3-231	ENST00000513098	ATP5E	P56381	51 aa	Predicted RBP	4.32	□□□□□ -1.72
UBE2D3-231	ENST00000513098	KRTAP4-3	Q9BYR4	195 aa		4.32	□□□□□ -1.72
UBE2D3-231	ENST00000513098	PRR15L	Q9BU68	103 aa		4.27	□□□□□ -1.73
UBE2D3-231	ENST00000513098	KRTAP9-9	Q9BYP9	154 aa		4.26	□□□□□ -1.73
UBE2D3-231	ENST00000513098	KRTAP9-4	Q9BYQ2	154 aa		4.26	□□□□□ -1.73
UBE2D3-231	ENST00000513098	KRTAP12-3	P60328	96 aa		4.24	□□□□□ -1.73
UBE2D3-231	ENST00000513098	KRTAP5-10	Q6L8G5	202 aa		4.23	□□□□□ -1.73
UBE2D3-231	ENST00000513098	LINC01558	Q9Y6Z2	57 aa		4.22	□□□□□ -1.73
UBE2D3-231	ENST00000513098	KRTAP4-7	Q9BYR0	210 aa		4.19	□□□□□ -1.74
UBE2D3-231	ENST00000513098	UQCR11	O14957	56 aa		4.14	□□□□□ -1.75
UBE2D3-231	ENST00000513098	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.14	□□□□□ -1.75
UBE2D3-231	ENST00000513098	PRO0628	Q9UI54	55 aa		4.13	□□□□□ -1.75
UBE2D3-231	ENST00000513098	SPRR5	A0A1B0GTR4	108 aa		4.11	□□□□□ -1.75
UBE2D3-231	ENST00000513098	KRTAP19-4	Q3LI73	84 aa		4.11	□□□□□ -1.75
UBE2D3-231	ENST00000513098	KRTAP20-2	Q3LI61	65 aa		4.1	□□□□□ -1.75
UBE2D3-231	ENST00000513098	KRTAP25-1	Q3LHN0	102 aa		4.09	□□□□□ -1.75
UBE2D3-231	ENST00000513098	KRTAP5-7	Q6L8G8	165 aa		4.09	□□□□□ -1.75
UBE2D3-231	ENST00000513098	KRTAP5-3	Q6L8H2	238 aa		4.09	□□□□□ -1.75
UBE2D3-231	ENST00000513098		Q1T7F1	81 aa		4.07	□□□□□ -1.76
UBE2D3-231	ENST00000513098		H3BS24	57 aa		4.05	□□□□□ -1.76
UBE2D3-231	ENST00000513098	KRTAP12-4	P60329	112 aa		4.04	□□□□□ -1.76
UBE2D3-231	ENST00000513098		V9GYY9	64 aa		4.03	□□□□□ -1.76
UBE2D3-231	ENST00000513098	SYNE1	Q8NF91	8797 aa	Known RBP	4.03	□□□□□ -1.76
UBE2D3-231	ENST00000513098	MIR22HG	Q0VDD5	57 aa		4.01	□□□□□ -1.77
UBE2D3-231	ENST00000513098	KRTAP23-1	A1A580	65 aa		4	□□□□□ -1.77
UBE2D3-231	ENST00000513098	BRK1	Q8WUW1	75 aa		4	□□□□□ -1.77
UBE2D3-231	ENST00000513098		K7ERS5	55 aa		3.97	□□□□□ -1.77
UBE2D3-231	ENST00000513098	KRTAP15-1	Q3LI76	137 aa		3.93	□□□□□ -1.78
UBE2D3-231	ENST00000513098	PSPHP1	O15172	72 aa		3.91	□□□□□ -1.78
UBE2D3-231	ENST00000513098	LCE3C	Q5T5A8	94 aa		3.9	□□□□□ -1.79
UBE2D3-231	ENST00000513098	KRTAP4-2	Q9BYR5	136 aa		3.86	□□□□□ -1.79
UBE2D3-231	ENST00000513098	CDC42SE1	Q9NRR8	79 aa		3.84	□□□□□ -1.79
UBE2D3-231	ENST00000513098	PMAIP1	Q13794	54 aa		3.83	□□□□□ -1.8
UBE2D3-231	ENST00000513098	KRTAP4-11	Q9BYQ6	195 aa		3.82	□□□□□ -1.8
UBE2D3-231	ENST00000513098		A6NED7	52 aa		3.81	□□□□□ -1.8
UBE2D3-231	ENST00000513098	KRTAP5-2	Q701N4	177 aa		3.81	□□□□□ -1.8
UBE2D3-231	ENST00000513098	MT1A	P04731	61 aa		3.79	□□□□□ -1.8
UBE2D3-231	ENST00000513098	KTN1-AS1	Q86SY8	53 aa		3.79	□□□□□ -1.8
UBE2D3-231	ENST00000513098	KRTAP6-1	Q3LI64	71 aa		3.76	□□□□□ -1.81
UBE2D3-231	ENST00000513098	KRTAP9-6	A8MVA2	160 aa		3.68	□□□□□ -1.82
UBE2D3-231	ENST00000513098	ROMO1	P60602	79 aa		3.67	□□□□□ -1.82
UBE2D3-231	ENST00000513098	KRTAP5-8	O75690	187 aa		3.66	□□□□□ -1.82
UBE2D3-231	ENST00000513098	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.62	□□□□□ -1.83
UBE2D3-231	ENST00000513098	KRTAP6-2	Q3LI66	62 aa		3.62	□□□□□ -1.83
UBE2D3-231	ENST00000513098	AHNAK	Q09666	5890 aa	Known RBP	3.6	□□□□□ -1.83
UBE2D3-231	ENST00000513098	OBSCN	Q5VST9	7968 aa		3.59	□□□□□ -1.83
UBE2D3-231	ENST00000513098	MUC5AC	P98088	5654 aa		3.55	□□□□□ -1.84
UBE2D3-231	ENST00000513098	PRAC1	Q96KF2	57 aa		3.51	□□□□□ -1.85
UBE2D3-231	ENST00000513098	MT3	P25713	68 aa		3.49	□□□□□ -1.85
UBE2D3-231	ENST00000513098	KRTAP5-1	Q6L8H4	278 aa		3.43	□□□□□ -1.86
UBE2D3-231	ENST00000513098	LCE1E	Q5T753	118 aa		3.28	□□□□□ -1.88
UBE2D3-231	ENST00000513098	LCE1C	Q5T751	118 aa		3.04	□□□□□ -1.92
UBE2D3-231	ENST00000513098	LCE1B	Q5T7P3	118 aa		3.04	□□□□□ -1.92
UBE2D3-231	ENST00000513098	NDUFAF8	A1L188	74 aa		2.96	□□□□□ -1.94
UBE2D3-231	ENST00000513098	LUZP6	Q538Z0	58 aa		2.79	□□□□□ -1.96
UBE2D3-231	ENST00000513098	LCE3D	Q9BYE3	92 aa		2.79	□□□□□ -1.96
UBE2D3-231	ENST00000513098	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.76	□□□□□ -1.97
UBE2D3-231	ENST00000513098	KRTAP5-11	Q6L8G4	156 aa		2.74	□□□□□ -1.97
UBE2D3-231	ENST00000513098	LCE1F	Q5T754	118 aa		2.73	□□□□□ -1.97
UBE2D3-231	ENST00000513098		A0A0A0MQY5	61 aa		2.7	□□□□□ -1.98
UBE2D3-231	ENST00000513098	LCE3E	Q5T5B0	92 aa		2.59	□□□□□ -1.99
UBE2D3-231	ENST00000513098	KRTAP21-2	Q3LI59	83 aa		2.52	□□□□□ -2.01
UBE2D3-231	ENST00000513098	INE1	O15225	51 aa		2.51	□□□□□ -2.01
UBE2D3-231	ENST00000513098	PHGR1	C9JFL3	82 aa		2.43	□□□□□ -2.02
UBE2D3-231	ENST00000513098	KRTAP4-4	Q9BYR3	166 aa		2.25	□□□□□ -2.05
UBE2D3-231	ENST00000513098	MUC19	Q7Z5P9	8384 aa		2.24	□□□□□ -2.05
UBE2D3-231	ENST00000513098	KRTAP21-1	Q3LI58	79 aa		1.88	□□□□□ -2.11
UBE2D3-231	ENST00000513098	PRM1	P04553	51 aa		1.86	□□□□□ -2.11
UBE2D3-231	ENST00000513098	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 389.3 ms