RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 TNP1P09430 55 aa5.11□□□□□ -1.59
CCHCR1-229ENST00000512418 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
CCHCR1-229ENST00000512418 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
CCHCR1-229ENST00000512418 CCDC179H3BU77 68 aa5.1□□□□□ -1.59
CCHCR1-229ENST00000512418 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
CCHCR1-229ENST00000512418 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
CCHCR1-229ENST00000512418 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
CCHCR1-229ENST00000512418 TMEM258P61165 79 aa5□□□□□ -1.61
CCHCR1-229ENST00000512418 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
CCHCR1-229ENST00000512418 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
CCHCR1-229ENST00000512418 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
CCHCR1-229ENST00000512418 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
CCHCR1-229ENST00000512418 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
CCHCR1-229ENST00000512418 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
CCHCR1-229ENST00000512418 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
CCHCR1-229ENST00000512418 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
CCHCR1-229ENST00000512418 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
CCHCR1-229ENST00000512418 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
CCHCR1-229ENST00000512418 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
CCHCR1-229ENST00000512418 UQCR11O14957 56 aa4.77□□□□□ -1.65
CCHCR1-229ENST00000512418 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
CCHCR1-229ENST00000512418 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
CCHCR1-229ENST00000512418 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
CCHCR1-229ENST00000512418 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
CCHCR1-229ENST00000512418 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
CCHCR1-229ENST00000512418 V9GYY9 64 aa4.65□□□□□ -1.67
CCHCR1-229ENST00000512418 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
CCHCR1-229ENST00000512418 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
CCHCR1-229ENST00000512418 K7ERS5 55 aa4.6□□□□□ -1.67
CCHCR1-229ENST00000512418 Q1T7F1 81 aa4.6□□□□□ -1.67
CCHCR1-229ENST00000512418 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CCHCR1-229ENST00000512418 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
CCHCR1-229ENST00000512418 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
CCHCR1-229ENST00000512418 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
CCHCR1-229ENST00000512418 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
CCHCR1-229ENST00000512418 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
CCHCR1-229ENST00000512418 MT1AP04731 61 aa4.44□□□□□ -1.7
CCHCR1-229ENST00000512418 PSPHP1O15172 72 aa4.42□□□□□ -1.7
CCHCR1-229ENST00000512418 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
CCHCR1-229ENST00000512418 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
CCHCR1-229ENST00000512418 A6NED7 52 aa4.34□□□□□ -1.71
CCHCR1-229ENST00000512418 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
CCHCR1-229ENST00000512418 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
CCHCR1-229ENST00000512418 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CCHCR1-229ENST00000512418 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
CCHCR1-229ENST00000512418 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
CCHCR1-229ENST00000512418 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
CCHCR1-229ENST00000512418 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
CCHCR1-229ENST00000512418 ROMO1P60602 79 aa4.23□□□□□ -1.73
CCHCR1-229ENST00000512418 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
CCHCR1-229ENST00000512418 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.74
CCHCR1-229ENST00000512418 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
CCHCR1-229ENST00000512418 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
CCHCR1-229ENST00000512418 MT3P25713 68 aa4.08□□□□□ -1.76
CCHCR1-229ENST00000512418 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
CCHCR1-229ENST00000512418 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
CCHCR1-229ENST00000512418 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
CCHCR1-229ENST00000512418 H3BS24 57 aa3.61□□□□□ -1.83
CCHCR1-229ENST00000512418 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
CCHCR1-229ENST00000512418 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
CCHCR1-229ENST00000512418 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
CCHCR1-229ENST00000512418 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CCHCR1-229ENST00000512418 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
CCHCR1-229ENST00000512418 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
CCHCR1-229ENST00000512418 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
CCHCR1-229ENST00000512418 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CCHCR1-229ENST00000512418 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
CCHCR1-229ENST00000512418 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CCHCR1-229ENST00000512418 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CCHCR1-229ENST00000512418 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
CCHCR1-229ENST00000512418 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
CCHCR1-229ENST00000512418 INE1O15225 51 aa2.91□□□□□ -1.94
CCHCR1-229ENST00000512418 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
CCHCR1-229ENST00000512418 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
CCHCR1-229ENST00000512418 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
CCHCR1-229ENST00000512418 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
CCHCR1-229ENST00000512418 PRM1P04553 51 aa2.15□□□□□ -2.07
CCHCR1-229ENST00000512418 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms