RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
SH3RF1-205ENST00000511421 A0A0D9SG42 100 aa4.51□□□□□ -1.69
SH3RF1-205ENST00000511421 A0A1B0GU33 70 aa4.51□□□□□ -1.69
SH3RF1-205ENST00000511421 SPRR2DP22532 72 aa4.46□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
SH3RF1-205ENST00000511421 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
SH3RF1-205ENST00000511421 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
SH3RF1-205ENST00000511421 MT1EP04732 61 aa4.33□□□□□ -1.72
SH3RF1-205ENST00000511421 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
SH3RF1-205ENST00000511421 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
SH3RF1-205ENST00000511421 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
SH3RF1-205ENST00000511421 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
SH3RF1-205ENST00000511421 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
SH3RF1-205ENST00000511421 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
SH3RF1-205ENST00000511421 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
SH3RF1-205ENST00000511421 TNP1P09430 55 aa4.19□□□□□ -1.74
SH3RF1-205ENST00000511421 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
SH3RF1-205ENST00000511421 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
SH3RF1-205ENST00000511421 MT1GP13640 62 aa4.18□□□□□ -1.74
SH3RF1-205ENST00000511421 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
SH3RF1-205ENST00000511421 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
SH3RF1-205ENST00000511421 MT1LQ93083 61 aa4.14□□□□□ -1.75
SH3RF1-205ENST00000511421 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SH3RF1-205ENST00000511421 PP632Q6XCG6 107 aa4.12□□□□□ -1.75
SH3RF1-205ENST00000511421 MT1MQ8N339 61 aa4.12□□□□□ -1.75
SH3RF1-205ENST00000511421 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
SH3RF1-205ENST00000511421 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
SH3RF1-205ENST00000511421 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
SH3RF1-205ENST00000511421 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
SH3RF1-205ENST00000511421 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
SH3RF1-205ENST00000511421 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SH3RF1-205ENST00000511421 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
SH3RF1-205ENST00000511421 MT4P47944 62 aa3.9□□□□□ -1.79
SH3RF1-205ENST00000511421 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SH3RF1-205ENST00000511421 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
SH3RF1-205ENST00000511421 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
SH3RF1-205ENST00000511421 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
SH3RF1-205ENST00000511421 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
SH3RF1-205ENST00000511421 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
SH3RF1-205ENST00000511421 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
SH3RF1-205ENST00000511421 INE1O15225 51 aa3.66□□□□□ -1.82
SH3RF1-205ENST00000511421 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
SH3RF1-205ENST00000511421 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
SH3RF1-205ENST00000511421 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
SH3RF1-205ENST00000511421 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
SH3RF1-205ENST00000511421 MT1AP04731 61 aa3.52□□□□□ -1.85
SH3RF1-205ENST00000511421 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
SH3RF1-205ENST00000511421 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
SH3RF1-205ENST00000511421 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
SH3RF1-205ENST00000511421 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
SH3RF1-205ENST00000511421 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SH3RF1-205ENST00000511421 MT3P25713 68 aa3.21□□□□□ -1.9
SH3RF1-205ENST00000511421 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
SH3RF1-205ENST00000511421 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
SH3RF1-205ENST00000511421 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
SH3RF1-205ENST00000511421 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
SH3RF1-205ENST00000511421 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
SH3RF1-205ENST00000511421 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
SH3RF1-205ENST00000511421 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
SH3RF1-205ENST00000511421 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SH3RF1-205ENST00000511421 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
SH3RF1-205ENST00000511421 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
SH3RF1-205ENST00000511421 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
SH3RF1-205ENST00000511421 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
SH3RF1-205ENST00000511421 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SH3RF1-205ENST00000511421 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SH3RF1-205ENST00000511421 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SH3RF1-205ENST00000511421 PRM1P04553 51 aa2.19□□□□□ -2.06
SH3RF1-205ENST00000511421 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SH3RF1-205ENST00000511421 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SH3RF1-205ENST00000511421 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SH3RF1-205ENST00000511421 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms