RNA–Protein interactions for RNA: ENST00000511206.5

HMGCR-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGCR, Length 3,395 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-209ENST00000511206 MT1BP07438 61 aa2.78□□□□□ -1.96
HMGCR-209ENST00000511206 M0R2T5 61 aa2.78□□□□□ -1.96
HMGCR-209ENST00000511206 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
HMGCR-209ENST00000511206 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
HMGCR-209ENST00000511206 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
HMGCR-209ENST00000511206 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
HMGCR-209ENST00000511206 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
HMGCR-209ENST00000511206 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
HMGCR-209ENST00000511206 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
HMGCR-209ENST00000511206 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
HMGCR-209ENST00000511206 USH2AO75445 5202 aa2.55□□□□□ -2
HMGCR-209ENST00000511206 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
HMGCR-209ENST00000511206 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
HMGCR-209ENST00000511206 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
HMGCR-209ENST00000511206 KMT2DO14686 5537 aa2.53□□□□□ -2
HMGCR-209ENST00000511206 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
HMGCR-209ENST00000511206 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
HMGCR-209ENST00000511206 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
HMGCR-209ENST00000511206 MT1LQ93083 61 aa2.42□□□□□ -2.02
HMGCR-209ENST00000511206 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
HMGCR-209ENST00000511206 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
HMGCR-209ENST00000511206 MT1EP04732 61 aa2.41□□□□□ -2.02
HMGCR-209ENST00000511206 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
HMGCR-209ENST00000511206 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
HMGCR-209ENST00000511206 FCGBPQ9Y6R7 5405 aaPredicted RBP2.33□□□□□ -2.04
HMGCR-209ENST00000511206 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
HMGCR-209ENST00000511206 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
HMGCR-209ENST00000511206 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
HMGCR-209ENST00000511206 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
HMGCR-209ENST00000511206 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
HMGCR-209ENST00000511206 MT1GP13640 62 aa2.24□□□□□ -2.05
HMGCR-209ENST00000511206 MT1MQ8N339 61 aa2.24□□□□□ -2.05
HMGCR-209ENST00000511206 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
HMGCR-209ENST00000511206 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
HMGCR-209ENST00000511206 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
HMGCR-209ENST00000511206 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
HMGCR-209ENST00000511206 PRM1P04553 51 aa2.19□□□□□ -2.06
HMGCR-209ENST00000511206 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
HMGCR-209ENST00000511206 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
HMGCR-209ENST00000511206 MT1AP04731 61 aa2.13□□□□□ -2.07
HMGCR-209ENST00000511206 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
HMGCR-209ENST00000511206 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
HMGCR-209ENST00000511206 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
HMGCR-209ENST00000511206 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
HMGCR-209ENST00000511206 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
HMGCR-209ENST00000511206 SPRR2FQ96RM1 72 aa2.03□□□□□ -2.08
HMGCR-209ENST00000511206 MDN1Q9NU22 5596 aa2□□□□□ -2.09
HMGCR-209ENST00000511206 MT3P25713 68 aa1.99□□□□□ -2.09
HMGCR-209ENST00000511206 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.09
HMGCR-209ENST00000511206 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
HMGCR-209ENST00000511206 NEBP20929 6669 aa1.96□□□□□ -2.1
HMGCR-209ENST00000511206 KRTAP20-1Q3LI63 56 aa1.9□□□□□ -2.1
HMGCR-209ENST00000511206 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
HMGCR-209ENST00000511206 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
HMGCR-209ENST00000511206 SPRR2EP22531 72 aa1.81□□□□□ -2.12
HMGCR-209ENST00000511206 SPRR2BP35325 72 aa1.81□□□□□ -2.12
HMGCR-209ENST00000511206 SPRR2AP35326 72 aa1.81□□□□□ -2.12
HMGCR-209ENST00000511206 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
HMGCR-209ENST00000511206 SPRR2DP22532 72 aa1.73□□□□□ -2.13
HMGCR-209ENST00000511206 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
HMGCR-209ENST00000511206 MT4P47944 62 aa1.66□□□□□ -2.14
HMGCR-209ENST00000511206 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
HMGCR-209ENST00000511206 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
HMGCR-209ENST00000511206 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
HMGCR-209ENST00000511206 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
HMGCR-209ENST00000511206 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
HMGCR-209ENST00000511206 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
HMGCR-209ENST00000511206 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
HMGCR-209ENST00000511206 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
HMGCR-209ENST00000511206 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
HMGCR-209ENST00000511206 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
HMGCR-209ENST00000511206 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
HMGCR-209ENST00000511206 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
HMGCR-209ENST00000511206 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
HMGCR-209ENST00000511206 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
HMGCR-209ENST00000511206 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
HMGCR-209ENST00000511206 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms