RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
RBM47-207ENST00000510871 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
RBM47-207ENST00000510871 SPRR2DP22532 72 aa4.38□□□□□ -1.71
RBM47-207ENST00000510871 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
RBM47-207ENST00000510871 MT1MQ8N339 61 aa4.34□□□□□ -1.71
RBM47-207ENST00000510871 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
RBM47-207ENST00000510871 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
RBM47-207ENST00000510871 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
RBM47-207ENST00000510871 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
RBM47-207ENST00000510871 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
RBM47-207ENST00000510871 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
RBM47-207ENST00000510871 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
RBM47-207ENST00000510871 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
RBM47-207ENST00000510871 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
RBM47-207ENST00000510871 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
RBM47-207ENST00000510871 PRM1P04553 51 aa4.16□□□□□ -1.74
RBM47-207ENST00000510871 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.76
RBM47-207ENST00000510871 USH2AO75445 5202 aa4.07□□□□□ -1.76
RBM47-207ENST00000510871 MT3P25713 68 aa4.01□□□□□ -1.77
RBM47-207ENST00000510871 MT1AP04731 61 aa3.97□□□□□ -1.77
RBM47-207ENST00000510871 KMT2DO14686 5537 aa3.94□□□□□ -1.78
RBM47-207ENST00000510871 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
RBM47-207ENST00000510871 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
RBM47-207ENST00000510871 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
RBM47-207ENST00000510871 MT4P47944 62 aa3.89□□□□□ -1.79
RBM47-207ENST00000510871 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
RBM47-207ENST00000510871 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
RBM47-207ENST00000510871 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
RBM47-207ENST00000510871 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
RBM47-207ENST00000510871 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
RBM47-207ENST00000510871 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
RBM47-207ENST00000510871 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
RBM47-207ENST00000510871 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
RBM47-207ENST00000510871 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
RBM47-207ENST00000510871 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
RBM47-207ENST00000510871 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
RBM47-207ENST00000510871 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.83
RBM47-207ENST00000510871 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
RBM47-207ENST00000510871 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
RBM47-207ENST00000510871 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
RBM47-207ENST00000510871 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
RBM47-207ENST00000510871 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
RBM47-207ENST00000510871 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
RBM47-207ENST00000510871 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
RBM47-207ENST00000510871 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
RBM47-207ENST00000510871 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
RBM47-207ENST00000510871 NEBP20929 6669 aa3.27□□□□□ -1.89
RBM47-207ENST00000510871 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
RBM47-207ENST00000510871 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
RBM47-207ENST00000510871 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.89
RBM47-207ENST00000510871 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
RBM47-207ENST00000510871 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
RBM47-207ENST00000510871 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
RBM47-207ENST00000510871 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
RBM47-207ENST00000510871 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
RBM47-207ENST00000510871 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
RBM47-207ENST00000510871 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
RBM47-207ENST00000510871 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
RBM47-207ENST00000510871 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
RBM47-207ENST00000510871 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
RBM47-207ENST00000510871 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
RBM47-207ENST00000510871 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
RBM47-207ENST00000510871 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
RBM47-207ENST00000510871 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
RBM47-207ENST00000510871 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
RBM47-207ENST00000510871 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
RBM47-207ENST00000510871 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
RBM47-207ENST00000510871 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
RBM47-207ENST00000510871 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
RBM47-207ENST00000510871 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
RBM47-207ENST00000510871 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
RBM47-207ENST00000510871 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
RBM47-207ENST00000510871 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
RBM47-207ENST00000510871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
RBM47-207ENST00000510871 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
RBM47-207ENST00000510871 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
RBM47-207ENST00000510871 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
RBM47-207ENST00000510871 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms