RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
CALCOCO2-216ENST00000509784 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
CALCOCO2-216ENST00000509784 DMBT1Q9UGM3 2413 aaPredicted RBP1.28□□□□□ -2.2
CALCOCO2-216ENST00000509784 LPAP08519 4548 aa1.28□□□□□ -2.2
CALCOCO2-216ENST00000509784 LRP2P98164 4655 aa1.28□□□□□ -2.2
CALCOCO2-216ENST00000509784 ABCA13Q86UQ4 5058 aa1.28□□□□□ -2.21
CALCOCO2-216ENST00000509784 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
CALCOCO2-216ENST00000509784 PLAC4Q8WY50 150 aa1.27□□□□□ -2.21
CALCOCO2-216ENST00000509784 KIAA1109Q2LD37 5005 aa1.26□□□□□ -2.21
CALCOCO2-216ENST00000509784 Q5VSD8 79 aa1.25□□□□□ -2.21
CALCOCO2-216ENST00000509784 PRO2289Q9P1D8 64 aa1.25□□□□□ -2.21
CALCOCO2-216ENST00000509784 MT1HL1P0DM35 61 aa1.24□□□□□ -2.21
CALCOCO2-216ENST00000509784 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
CALCOCO2-216ENST00000509784 KRTAP19-2Q3LHN2 52 aa1.19□□□□□ -2.22
CALCOCO2-216ENST00000509784 HMCN2Q8NDA2 5059 aa1.18□□□□□ -2.22
CALCOCO2-216ENST00000509784 MUC2Q02817 5179 aa1.17□□□□□ -2.22
CALCOCO2-216ENST00000509784 TNP1P09430 55 aa1.17□□□□□ -2.22
CALCOCO2-216ENST00000509784 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
CALCOCO2-216ENST00000509784 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
CALCOCO2-216ENST00000509784 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
CALCOCO2-216ENST00000509784 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
CALCOCO2-216ENST00000509784 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
CALCOCO2-216ENST00000509784 INE1O15225 51 aa1.13□□□□□ -2.23
CALCOCO2-216ENST00000509784 CRCT1Q9UGL9 99 aa1.12□□□□□ -2.23
CALCOCO2-216ENST00000509784 SPRR2GQ9BYE4 73 aa1.11□□□□□ -2.23
CALCOCO2-216ENST00000509784 KRTAP8-1Q8IUC2 63 aa1.09□□□□□ -2.23
CALCOCO2-216ENST00000509784 KRTAP19-8Q3LI54 63 aa1.06□□□□□ -2.24
CALCOCO2-216ENST00000509784 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
CALCOCO2-216ENST00000509784 MT2AP02795 61 aa1.04□□□□□ -2.24
CALCOCO2-216ENST00000509784 MT1FP04733 61 aa1.04□□□□□ -2.24
CALCOCO2-216ENST00000509784 MT1XP80297 61 aa1.04□□□□□ -2.24
CALCOCO2-216ENST00000509784 MT1BP07438 61 aa1.03□□□□□ -2.24
CALCOCO2-216ENST00000509784 MT1HP80294 61 aa1.03□□□□□ -2.24
CALCOCO2-216ENST00000509784 SYNE2Q8WXH0 6885 aaKnown RBP1.03□□□□□ -2.24
CALCOCO2-216ENST00000509784 SSPOA2VEC9 5147 aa1□□□□□ -2.25
CALCOCO2-216ENST00000509784 MACF1Q9UPN3 7388 aaKnown RBP1□□□□□ -2.25
CALCOCO2-216ENST00000509784 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
CALCOCO2-216ENST00000509784 M0R2T5 61 aa0.99□□□□□ -2.25
CALCOCO2-216ENST00000509784 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
CALCOCO2-216ENST00000509784 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
CALCOCO2-216ENST00000509784 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
CALCOCO2-216ENST00000509784 KRTAP19-5Q3LI72 72 aa0.97□□□□□ -2.25
CALCOCO2-216ENST00000509784 NEBP20929 6669 aa0.96□□□□□ -2.26
CALCOCO2-216ENST00000509784 KRTAP20-1Q3LI63 56 aa0.95□□□□□ -2.26
CALCOCO2-216ENST00000509784 USH2AO75445 5202 aa0.95□□□□□ -2.26
CALCOCO2-216ENST00000509784 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
CALCOCO2-216ENST00000509784 FCGBPQ9Y6R7 5405 aaPredicted RBP0.92□□□□□ -2.26
CALCOCO2-216ENST00000509784 MT1LQ93083 61 aa0.91□□□□□ -2.26
CALCOCO2-216ENST00000509784 MT1EP04732 61 aa0.9□□□□□ -2.27
CALCOCO2-216ENST00000509784 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
CALCOCO2-216ENST00000509784 KMT2DO14686 5537 aa0.9□□□□□ -2.27
CALCOCO2-216ENST00000509784 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
CALCOCO2-216ENST00000509784 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
CALCOCO2-216ENST00000509784 MT1MQ8N339 61 aa0.84□□□□□ -2.27
CALCOCO2-216ENST00000509784 MT1GP13640 62 aa0.83□□□□□ -2.28
CALCOCO2-216ENST00000509784 SYNE1Q8NF91 8797 aaKnown RBP0.82□□□□□ -2.28
CALCOCO2-216ENST00000509784 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
CALCOCO2-216ENST00000509784 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
CALCOCO2-216ENST00000509784 MT1AP04731 61 aa0.8□□□□□ -2.28
CALCOCO2-216ENST00000509784 SPRR2EP22531 72 aa0.78□□□□□ -2.28
CALCOCO2-216ENST00000509784 SPRR2BP35325 72 aa0.78□□□□□ -2.28
CALCOCO2-216ENST00000509784 SPRR2AP35326 72 aa0.78□□□□□ -2.28
CALCOCO2-216ENST00000509784 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.28
CALCOCO2-216ENST00000509784 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
CALCOCO2-216ENST00000509784 PRM1P04553 51 aa0.77□□□□□ -2.29
CALCOCO2-216ENST00000509784 SPRR2DP22532 72 aa0.77□□□□□ -2.29
CALCOCO2-216ENST00000509784 KRTAP6-1Q3LI64 71 aa0.76□□□□□ -2.29
CALCOCO2-216ENST00000509784 SPRR2FQ96RM1 72 aa0.76□□□□□ -2.29
CALCOCO2-216ENST00000509784 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
CALCOCO2-216ENST00000509784 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
CALCOCO2-216ENST00000509784 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
CALCOCO2-216ENST00000509784 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
CALCOCO2-216ENST00000509784 MT4P47944 62 aa0.65□□□□□ -2.31
CALCOCO2-216ENST00000509784 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
CALCOCO2-216ENST00000509784 KRTAP20-2Q3LI61 65 aa0.58□□□□□ -2.32
CALCOCO2-216ENST00000509784 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
CALCOCO2-216ENST00000509784 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
CALCOCO2-216ENST00000509784 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms