RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 SPG11Q96JI7 2443 aa0.88□□□□□ -2.27
CAST-226ENST00000509529 CENPEQ02224 2701 aa0.88□□□□□ -2.27
CAST-226ENST00000509529 USP9YO00507 2555 aaPredicted RBP0.87□□□□□ -2.27
CAST-226ENST00000509529 USP9XQ93008 2570 aaPredicted RBP0.87□□□□□ -2.27
CAST-226ENST00000509529 FLG2Q5D862 2391 aaPredicted RBP0.87□□□□□ -2.27
CAST-226ENST00000509529 MUC3AQ02505 3323 aa0.86□□□□□ -2.27
CAST-226ENST00000509529 LPAP08519 4548 aa0.86□□□□□ -2.27
CAST-226ENST00000509529 PKD1L1Q8TDX9 2849 aa0.86□□□□□ -2.27
CAST-226ENST00000509529 ZFYVE26Q68DK2 2539 aa0.86□□□□□ -2.27
CAST-226ENST00000509529 MT1HL1P0DM35 61 aa0.86□□□□□ -2.27
CAST-226ENST00000509529 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
CAST-226ENST00000509529 CEP290O15078 2479 aa0.85□□□□□ -2.27
CAST-226ENST00000509529 CHD8Q9HCK8 2581 aa0.85□□□□□ -2.27
CAST-226ENST00000509529 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
CAST-226ENST00000509529 MYO18BQ8IUG5 2567 aa0.85□□□□□ -2.27
CAST-226ENST00000509529 FSIP2Q5CZC0 6907 aa0.84□□□□□ -2.27
CAST-226ENST00000509529 POLQO75417 2590 aa0.84□□□□□ -2.28
CAST-226ENST00000509529 NSD1Q96L73 2696 aaPredicted RBP0.83□□□□□ -2.28
CAST-226ENST00000509529 FLNAP21333 2647 aaKnown RBP0.83□□□□□ -2.28
CAST-226ENST00000509529 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
CAST-226ENST00000509529 LRRK2Q5S007 2527 aa0.82□□□□□ -2.28
CAST-226ENST00000509529 CCDC168Q8NDH2 2452 aa0.82□□□□□ -2.28
CAST-226ENST00000509529 ITPR2Q14571 2701 aa0.82□□□□□ -2.28
CAST-226ENST00000509529 KRTAP12-3P60328 96 aa0.82□□□□□ -2.28
CAST-226ENST00000509529 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
CAST-226ENST00000509529 SONP18583 2426 aaKnown RBP0.81□□□□□ -2.28
CAST-226ENST00000509529 MUC6Q6W4X9 2439 aa0.81□□□□□ -2.28
CAST-226ENST00000509529 MTORP42345 2549 aa0.81□□□□□ -2.28
CAST-226ENST00000509529 FLNCQ14315 2725 aa0.81□□□□□ -2.28
CAST-226ENST00000509529 KRTAP4-1Q9BYQ7 146 aa0.81□□□□□ -2.28
CAST-226ENST00000509529 FAM208BQ5VWN6 2430 aa0.8□□□□□ -2.28
CAST-226ENST00000509529 NBEAL1Q6ZS30 2694 aa0.8□□□□□ -2.28
CAST-226ENST00000509529 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
CAST-226ENST00000509529 STAB2Q8WWQ8 2551 aa0.79□□□□□ -2.28
CAST-226ENST00000509529 FCGBPQ9Y6R7 5405 aaPredicted RBP0.79□□□□□ -2.28
CAST-226ENST00000509529 ACANP16112 2415 aa0.79□□□□□ -2.28
CAST-226ENST00000509529 MT1XP80297 61 aa0.78□□□□□ -2.28
CAST-226ENST00000509529 MT1EP04732 61 aa0.78□□□□□ -2.28
CAST-226ENST00000509529 LRP2P98164 4655 aa0.78□□□□□ -2.29
CAST-226ENST00000509529 ATRQ13535 2644 aa0.78□□□□□ -2.29
CAST-226ENST00000509529 RIF1Q5UIP0 2472 aaKnown RBP0.78□□□□□ -2.29
CAST-226ENST00000509529 STAB1Q9NY15 2570 aa0.77□□□□□ -2.29
CAST-226ENST00000509529 MT1AP04731 61 aa0.77□□□□□ -2.29
CAST-226ENST00000509529 M0R2T5 61 aa0.76□□□□□ -2.29
CAST-226ENST00000509529 FLNBO75369 2602 aaKnown RBP0.76□□□□□ -2.29
CAST-226ENST00000509529 MT1BP07438 61 aa0.76□□□□□ -2.29
CAST-226ENST00000509529 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
CAST-226ENST00000509529 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
CAST-226ENST00000509529 MGAM2Q2M2H8 2515 aa0.74□□□□□ -2.29
CAST-226ENST00000509529 MT1LQ93083 61 aa0.73□□□□□ -2.29
CAST-226ENST00000509529 ACACBO00763 2458 aa0.72□□□□□ -2.29
CAST-226ENST00000509529 MT2AP02795 61 aa0.72□□□□□ -2.29
CAST-226ENST00000509529 KRTAP12-4P60329 112 aa0.72□□□□□ -2.29
CAST-226ENST00000509529 DMBT1Q9UGM3 2413 aaPredicted RBP0.7□□□□□ -2.3
CAST-226ENST00000509529 MT1FP04733 61 aa0.7□□□□□ -2.3
CAST-226ENST00000509529 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
CAST-226ENST00000509529 USH2AO75445 5202 aa0.7□□□□□ -2.3
CAST-226ENST00000509529 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
CAST-226ENST00000509529 MT1HP80294 61 aa0.69□□□□□ -2.3
CAST-226ENST00000509529 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
CAST-226ENST00000509529 SPRR2AP35326 72 aa0.66□□□□□ -2.3
CAST-226ENST00000509529 KRTAP19-6Q3LI70 58 aa0.66□□□□□ -2.3
CAST-226ENST00000509529 SPRR2BP35325 72 aa0.64□□□□□ -2.31
CAST-226ENST00000509529 RNF213Q63HN8 5207 aa0.64□□□□□ -2.31
CAST-226ENST00000509529 MT1GP13640 62 aa0.63□□□□□ -2.31
CAST-226ENST00000509529 MT1MQ8N339 61 aa0.63□□□□□ -2.31
CAST-226ENST00000509529 PRM1P04553 51 aa0.62□□□□□ -2.31
CAST-226ENST00000509529 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
CAST-226ENST00000509529 SPRR2EP22531 72 aa0.6□□□□□ -2.31
CAST-226ENST00000509529 SPRR2DP22532 72 aa0.58□□□□□ -2.32
CAST-226ENST00000509529 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
CAST-226ENST00000509529 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
CAST-226ENST00000509529 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
CAST-226ENST00000509529 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
CAST-226ENST00000509529 MUC12Q9UKN1 5478 aa0.53□□□□□ -2.32
CAST-226ENST00000509529 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
CAST-226ENST00000509529 KRTAP20-2Q3LI61 65 aa0.39□□□□□ -2.35
CAST-226ENST00000509529 MT4P47944 62 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 260.4 ms