RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 LRP1Q07954 4544 aaKnown RBP1.72□□□□□ -2.13
NIPBL-206ENST00000509429 RYR2Q92736 4967 aa1.7□□□□□ -2.14
NIPBL-206ENST00000509429 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
NIPBL-206ENST00000509429 RYR1P21817 5038 aa1.64□□□□□ -2.15
NIPBL-206ENST00000509429 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
NIPBL-206ENST00000509429 KMT2CQ8NEZ4 4911 aaKnown RBP1.6□□□□□ -2.15
NIPBL-206ENST00000509429 RYR3Q15413 4870 aa1.59□□□□□ -2.15
NIPBL-206ENST00000509429 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
NIPBL-206ENST00000509429 TNP1P09430 55 aa1.58□□□□□ -2.16
NIPBL-206ENST00000509429 LRP2P98164 4655 aa1.55□□□□□ -2.16
NIPBL-206ENST00000509429 HERC1Q15751 4861 aa1.55□□□□□ -2.16
NIPBL-206ENST00000509429 LPAP08519 4548 aa1.54□□□□□ -2.16
NIPBL-206ENST00000509429 FLGP20930 4061 aaPredicted RBP1.53□□□□□ -2.16
NIPBL-206ENST00000509429 KIAA1109Q2LD37 5005 aa1.53□□□□□ -2.16
NIPBL-206ENST00000509429 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
NIPBL-206ENST00000509429 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
NIPBL-206ENST00000509429 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
NIPBL-206ENST00000509429 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
NIPBL-206ENST00000509429 BIRC6Q9NR09 4857 aa1.49□□□□□ -2.17
NIPBL-206ENST00000509429 ABCA13Q86UQ4 5058 aa1.48□□□□□ -2.17
NIPBL-206ENST00000509429 M0R2T5 61 aa1.47□□□□□ -2.17
NIPBL-206ENST00000509429 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
NIPBL-206ENST00000509429 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
NIPBL-206ENST00000509429 EPPK1P58107 5090 aaKnown RBP1.46□□□□□ -2.18
NIPBL-206ENST00000509429 HERC2O95714 4834 aa1.42□□□□□ -2.18
NIPBL-206ENST00000509429 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
NIPBL-206ENST00000509429 HMCN2Q8NDA2 5059 aa1.4□□□□□ -2.19
NIPBL-206ENST00000509429 KRTAP19-8Q3LI54 63 aa1.39□□□□□ -2.19
NIPBL-206ENST00000509429 PCLOQ9Y6V0 5065 aa1.38□□□□□ -2.19
NIPBL-206ENST00000509429 MT2AP02795 61 aa1.36□□□□□ -2.19
NIPBL-206ENST00000509429 MT1HP80294 61 aa1.36□□□□□ -2.19
NIPBL-206ENST00000509429 MT1FP04733 61 aa1.35□□□□□ -2.19
NIPBL-206ENST00000509429 MT1XP80297 61 aa1.34□□□□□ -2.19
NIPBL-206ENST00000509429 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
NIPBL-206ENST00000509429 MUC2Q02817 5179 aa1.32□□□□□ -2.2
NIPBL-206ENST00000509429 MT1BP07438 61 aa1.32□□□□□ -2.2
NIPBL-206ENST00000509429 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
NIPBL-206ENST00000509429 UBR4Q5T4S7 5183 aa1.29□□□□□ -2.2
NIPBL-206ENST00000509429 PRM1P04553 51 aa1.28□□□□□ -2.2
NIPBL-206ENST00000509429 KRTAP19-5Q3LI72 72 aa1.25□□□□□ -2.21
NIPBL-206ENST00000509429 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
NIPBL-206ENST00000509429 KRTAP19-7Q3SYF9 63 aa1.18□□□□□ -2.22
NIPBL-206ENST00000509429 MT1LQ93083 61 aa1.18□□□□□ -2.22
NIPBL-206ENST00000509429 MT1EP04732 61 aa1.17□□□□□ -2.22
NIPBL-206ENST00000509429 MT1AP04731 61 aa1.15□□□□□ -2.23
NIPBL-206ENST00000509429 USH2AO75445 5202 aa1.13□□□□□ -2.23
NIPBL-206ENST00000509429 SSPOA2VEC9 5147 aa1.12□□□□□ -2.23
NIPBL-206ENST00000509429 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
NIPBL-206ENST00000509429 KMT2DO14686 5537 aa1.11□□□□□ -2.23
NIPBL-206ENST00000509429 KRTAP19-6Q3LI70 58 aa1.11□□□□□ -2.23
NIPBL-206ENST00000509429 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
NIPBL-206ENST00000509429 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
NIPBL-206ENST00000509429 MT1GP13640 62 aa1.09□□□□□ -2.23
NIPBL-206ENST00000509429 MT1MQ8N339 61 aa1.09□□□□□ -2.23
NIPBL-206ENST00000509429 SPRR2DP22532 72 aa1.04□□□□□ -2.24
NIPBL-206ENST00000509429 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
NIPBL-206ENST00000509429 SPRR2BP35325 72 aa1.02□□□□□ -2.25
NIPBL-206ENST00000509429 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
NIPBL-206ENST00000509429 SPRR2AP35326 72 aa1□□□□□ -2.25
NIPBL-206ENST00000509429 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
NIPBL-206ENST00000509429 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
NIPBL-206ENST00000509429 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
NIPBL-206ENST00000509429 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
NIPBL-206ENST00000509429 MACF1Q9UPN3 7388 aaKnown RBP0.93□□□□□ -2.26
NIPBL-206ENST00000509429 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
NIPBL-206ENST00000509429 SPRR2EP22531 72 aa0.92□□□□□ -2.26
NIPBL-206ENST00000509429 SYNE2Q8WXH0 6885 aaKnown RBP0.88□□□□□ -2.27
NIPBL-206ENST00000509429 FSIP2Q5CZC0 6907 aa0.88□□□□□ -2.27
NIPBL-206ENST00000509429 DSTQ03001 7570 aaKnown RBP0.87□□□□□ -2.27
NIPBL-206ENST00000509429 NEBP20929 6669 aa0.8□□□□□ -2.28
NIPBL-206ENST00000509429 MUC5ACP98088 5654 aa0.78□□□□□ -2.28
NIPBL-206ENST00000509429 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
NIPBL-206ENST00000509429 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
NIPBL-206ENST00000509429 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
NIPBL-206ENST00000509429 MT4P47944 62 aa0.71□□□□□ -2.3
NIPBL-206ENST00000509429 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
NIPBL-206ENST00000509429 GPR98Q8WXG9 6306 aa0.56□□□□□ -2.32
NIPBL-206ENST00000509429 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms