RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
TRIM41-204ENST00000508930 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
TRIM41-204ENST00000508930 MT1EP04732 61 aa4.75□□□□□ -1.65
TRIM41-204ENST00000508930 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
TRIM41-204ENST00000508930 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
TRIM41-204ENST00000508930 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
TRIM41-204ENST00000508930 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
TRIM41-204ENST00000508930 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
TRIM41-204ENST00000508930 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
TRIM41-204ENST00000508930 MT1GP13640 62 aa4.63□□□□□ -1.67
TRIM41-204ENST00000508930 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
TRIM41-204ENST00000508930 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
TRIM41-204ENST00000508930 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
TRIM41-204ENST00000508930 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
TRIM41-204ENST00000508930 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
TRIM41-204ENST00000508930 MT1MQ8N339 61 aa4.45□□□□□ -1.7
TRIM41-204ENST00000508930 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
TRIM41-204ENST00000508930 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
TRIM41-204ENST00000508930 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
TRIM41-204ENST00000508930 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
TRIM41-204ENST00000508930 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.72
TRIM41-204ENST00000508930 MDN1Q9NU22 5596 aa4.28□□□□□ -1.72
TRIM41-204ENST00000508930 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
TRIM41-204ENST00000508930 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
TRIM41-204ENST00000508930 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
TRIM41-204ENST00000508930 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.73
TRIM41-204ENST00000508930 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
TRIM41-204ENST00000508930 PRM1P04553 51 aa4.15□□□□□ -1.74
TRIM41-204ENST00000508930 SPRR2EP22531 72 aa4.15□□□□□ -1.75
TRIM41-204ENST00000508930 SPRR2BP35325 72 aa4.15□□□□□ -1.75
TRIM41-204ENST00000508930 SPRR2AP35326 72 aa4.15□□□□□ -1.75
TRIM41-204ENST00000508930 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
TRIM41-204ENST00000508930 MT1AP04731 61 aa4.13□□□□□ -1.75
TRIM41-204ENST00000508930 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
TRIM41-204ENST00000508930 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
TRIM41-204ENST00000508930 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
TRIM41-204ENST00000508930 SPRR2DP22532 72 aa3.96□□□□□ -1.78
TRIM41-204ENST00000508930 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
TRIM41-204ENST00000508930 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
TRIM41-204ENST00000508930 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
TRIM41-204ENST00000508930 NEBP20929 6669 aa3.78□□□□□ -1.8
TRIM41-204ENST00000508930 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
TRIM41-204ENST00000508930 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
TRIM41-204ENST00000508930 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
TRIM41-204ENST00000508930 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
TRIM41-204ENST00000508930 MT4P47944 62 aa3.69□□□□□ -1.82
TRIM41-204ENST00000508930 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
TRIM41-204ENST00000508930 MT3P25713 68 aa3.68□□□□□ -1.82
TRIM41-204ENST00000508930 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.84
TRIM41-204ENST00000508930 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
TRIM41-204ENST00000508930 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
TRIM41-204ENST00000508930 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
TRIM41-204ENST00000508930 KRTAP4-2Q9BYR5 136 aa3.3□□□□□ -1.88
TRIM41-204ENST00000508930 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
TRIM41-204ENST00000508930 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
TRIM41-204ENST00000508930 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
TRIM41-204ENST00000508930 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
TRIM41-204ENST00000508930 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
TRIM41-204ENST00000508930 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
TRIM41-204ENST00000508930 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
TRIM41-204ENST00000508930 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
TRIM41-204ENST00000508930 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
TRIM41-204ENST00000508930 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
TRIM41-204ENST00000508930 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
TRIM41-204ENST00000508930 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
TRIM41-204ENST00000508930 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
TRIM41-204ENST00000508930 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
TRIM41-204ENST00000508930 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
TRIM41-204ENST00000508930 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
TRIM41-204ENST00000508930 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
TRIM41-204ENST00000508930 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
TRIM41-204ENST00000508930 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
TRIM41-204ENST00000508930 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
TRIM41-204ENST00000508930 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
TRIM41-204ENST00000508930 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
TRIM41-204ENST00000508930 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
TRIM41-204ENST00000508930 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
TRIM41-204ENST00000508930 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 77.7 ms