RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 LINC00308Q8TCZ7 52 aa0.45□□□□□ -2.34
CHD1-205ENST00000508756 LRP1BQ9NZR2 4599 aa0.45□□□□□ -2.34
CHD1-205ENST00000508756 PKHD1P08F94 4074 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 DYNC1H1Q14204 4646 aaKnown RBP0.44□□□□□ -2.34
CHD1-205ENST00000508756 VPS13BQ7Z7G8 4022 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
CHD1-205ENST00000508756 DNAH2Q9P225 4427 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 TNXBP22105 4242 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 IGLV5-48A0A075B6I7 105 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 COX6B2Q6YFQ2 88 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 DNAH17Q9UFH2 4485 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 APOBP04114 4563 aaKnown RBP0.44□□□□□ -2.34
CHD1-205ENST00000508756 DNAH10Q8IVF4 4471 aa0.44□□□□□ -2.34
CHD1-205ENST00000508756 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
CHD1-205ENST00000508756 HSPG2P98160 4391 aa0.43□□□□□ -2.34
CHD1-205ENST00000508756 ATXN8Q156A1 80 aa0.43□□□□□ -2.34
CHD1-205ENST00000508756 UBR4Q5T4S7 5183 aa0.43□□□□□ -2.34
CHD1-205ENST00000508756 PKD1P98161 4303 aa0.43□□□□□ -2.34
CHD1-205ENST00000508756 HMCN2Q8NDA2 5059 aa0.43□□□□□ -2.34
CHD1-205ENST00000508756 MYCBP2O75592 4640 aa0.42□□□□□ -2.34
CHD1-205ENST00000508756 DNAH8Q96JB1 4490 aa0.42□□□□□ -2.34
CHD1-205ENST00000508756 FAT3Q8TDW7 4589 aa0.42□□□□□ -2.34
CHD1-205ENST00000508756 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
CHD1-205ENST00000508756 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
CHD1-205ENST00000508756 C9orf92A6NGG3 77 aa0.41□□□□□ -2.34
CHD1-205ENST00000508756 M0R2T5 61 aa0.41□□□□□ -2.34
CHD1-205ENST00000508756 UBL5Q9BZL1 73 aa0.41□□□□□ -2.34
CHD1-205ENST00000508756 FAT1Q14517 4588 aa0.41□□□□□ -2.34
CHD1-205ENST00000508756 LRP2P98164 4655 aa0.4□□□□□ -2.34
CHD1-205ENST00000508756 SRRM2Q9UQ35 2752 aaKnown RBP0.39□□□□□ -2.35
CHD1-205ENST00000508756 MMP24-AS1A0A0U1RRL7 71 aa0.39□□□□□ -2.35
CHD1-205ENST00000508756 MT1HP80294 61 aa0.39□□□□□ -2.35
CHD1-205ENST00000508756 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
CHD1-205ENST00000508756 MUC17Q685J3 4493 aa0.38□□□□□ -2.35
CHD1-205ENST00000508756 KRTAP19-2Q3LHN2 52 aa0.38□□□□□ -2.35
CHD1-205ENST00000508756 S4R3F8 94 aa0.38□□□□□ -2.35
CHD1-205ENST00000508756 LPAP08519 4548 aa0.38□□□□□ -2.35
CHD1-205ENST00000508756 MUC2Q02817 5179 aa0.38□□□□□ -2.35
CHD1-205ENST00000508756 H0YAA0 97 aa0.37□□□□□ -2.35
CHD1-205ENST00000508756 MT2AP02795 61 aa0.36□□□□□ -2.35
CHD1-205ENST00000508756 KRTAP19-6Q3LI70 58 aa0.36□□□□□ -2.35
CHD1-205ENST00000508756 FLGP20930 4061 aaPredicted RBP0.35□□□□□ -2.35
CHD1-205ENST00000508756 MT1FP04733 61 aa0.35□□□□□ -2.35
CHD1-205ENST00000508756 KRTAP19-8Q3LI54 63 aa0.35□□□□□ -2.35
CHD1-205ENST00000508756 SPRR2GQ9BYE4 73 aa0.35□□□□□ -2.35
CHD1-205ENST00000508756 USH2AO75445 5202 aa0.34□□□□□ -2.35
CHD1-205ENST00000508756 SSPOA2VEC9 5147 aa0.34□□□□□ -2.35
CHD1-205ENST00000508756 M0QZ58 72 aa0.34□□□□□ -2.36
CHD1-205ENST00000508756 MT1BP07438 61 aa0.33□□□□□ -2.36
CHD1-205ENST00000508756 KRTAP8-1Q8IUC2 63 aa0.32□□□□□ -2.36
CHD1-205ENST00000508756 MUC12Q9UKN1 5478 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 TNP1P09430 55 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 SPRR2EP22531 72 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 SPRR2BP35325 72 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 SPRR2AP35326 72 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 MT1XP80297 61 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 KRTAP20-1Q3LI63 56 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 SPRR2FQ96RM1 72 aa0.31□□□□□ -2.36
CHD1-205ENST00000508756 SPRR2DP22532 72 aa0.3□□□□□ -2.36
CHD1-205ENST00000508756 MT1GP13640 62 aa0.29□□□□□ -2.36
CHD1-205ENST00000508756 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
CHD1-205ENST00000508756 KMT2DO14686 5537 aa0.29□□□□□ -2.36
CHD1-205ENST00000508756 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
CHD1-205ENST00000508756 MT1EP04732 61 aa0.28□□□□□ -2.36
CHD1-205ENST00000508756 KRTAP19-7Q3SYF9 63 aa0.28□□□□□ -2.36
CHD1-205ENST00000508756 KRTAP19-5Q3LI72 72 aa0.27□□□□□ -2.37
CHD1-205ENST00000508756 MT1MQ8N339 61 aa0.27□□□□□ -2.37
CHD1-205ENST00000508756 MT1LQ93083 61 aa0.27□□□□□ -2.37
CHD1-205ENST00000508756 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
CHD1-205ENST00000508756 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
CHD1-205ENST00000508756 NEBP20929 6669 aa0.24□□□□□ -2.37
CHD1-205ENST00000508756 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
CHD1-205ENST00000508756 MT1AP04731 61 aa0.24□□□□□ -2.37
CHD1-205ENST00000508756 MT4P47944 62 aa0.24□□□□□ -2.37
CHD1-205ENST00000508756 KRTAP20-2Q3LI61 65 aa0.24□□□□□ -2.37
CHD1-205ENST00000508756 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
CHD1-205ENST00000508756 KRTAP6-2Q3LI66 62 aa0.2□□□□□ -2.38
CHD1-205ENST00000508756 GPR98Q8WXG9 6306 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 63.5 ms