RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
SKI-204ENST00000508416 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
SKI-204ENST00000508416 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
SKI-204ENST00000508416 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
SKI-204ENST00000508416 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
SKI-204ENST00000508416 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
SKI-204ENST00000508416 MT1GP13640 62 aa3.78□□□□□ -1.8
SKI-204ENST00000508416 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
SKI-204ENST00000508416 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
SKI-204ENST00000508416 MT1LQ93083 61 aa3.76□□□□□ -1.81
SKI-204ENST00000508416 ROMO1P60602 79 aa3.75□□□□□ -1.81
SKI-204ENST00000508416 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
SKI-204ENST00000508416 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.82
SKI-204ENST00000508416 MT1MQ8N339 61 aa3.71□□□□□ -1.82
SKI-204ENST00000508416 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
SKI-204ENST00000508416 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
SKI-204ENST00000508416 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
SKI-204ENST00000508416 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
SKI-204ENST00000508416 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
SKI-204ENST00000508416 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SKI-204ENST00000508416 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
SKI-204ENST00000508416 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
SKI-204ENST00000508416 MT4P47944 62 aa3.55□□□□□ -1.84
SKI-204ENST00000508416 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
SKI-204ENST00000508416 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SKI-204ENST00000508416 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
SKI-204ENST00000508416 PMAIP1Q13794 54 aa3.48□□□□□ -1.85
SKI-204ENST00000508416 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
SKI-204ENST00000508416 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
SKI-204ENST00000508416 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
SKI-204ENST00000508416 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
SKI-204ENST00000508416 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
SKI-204ENST00000508416 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
SKI-204ENST00000508416 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
SKI-204ENST00000508416 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
SKI-204ENST00000508416 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
SKI-204ENST00000508416 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
SKI-204ENST00000508416 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
SKI-204ENST00000508416 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
SKI-204ENST00000508416 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
SKI-204ENST00000508416 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
SKI-204ENST00000508416 MT1AP04731 61 aa3.21□□□□□ -1.9
SKI-204ENST00000508416 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
SKI-204ENST00000508416 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SKI-204ENST00000508416 SVIPQ8NHG7 77 aa3.17□□□□□ -1.9
SKI-204ENST00000508416 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
SKI-204ENST00000508416 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
SKI-204ENST00000508416 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
SKI-204ENST00000508416 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
SKI-204ENST00000508416 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
SKI-204ENST00000508416 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
SKI-204ENST00000508416 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SKI-204ENST00000508416 MT3P25713 68 aa2.93□□□□□ -1.94
SKI-204ENST00000508416 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
SKI-204ENST00000508416 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
SKI-204ENST00000508416 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
SKI-204ENST00000508416 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
SKI-204ENST00000508416 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
SKI-204ENST00000508416 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
SKI-204ENST00000508416 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
SKI-204ENST00000508416 NDUFAF8A1L188 74 aa2.53□□□□□ -2
SKI-204ENST00000508416 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SKI-204ENST00000508416 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
SKI-204ENST00000508416 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SKI-204ENST00000508416 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
SKI-204ENST00000508416 A0A0A0MQY5 61 aa2.34□□□□□ -2.03
SKI-204ENST00000508416 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SKI-204ENST00000508416 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
SKI-204ENST00000508416 INE1O15225 51 aa2.17□□□□□ -2.06
SKI-204ENST00000508416 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
SKI-204ENST00000508416 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
SKI-204ENST00000508416 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SKI-204ENST00000508416 H3BS24 57 aa2.08□□□□□ -2.08
SKI-204ENST00000508416 PRM1P04553 51 aa1.93□□□□□ -2.1
SKI-204ENST00000508416 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
SKI-204ENST00000508416 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SKI-204ENST00000508416 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
SKI-204ENST00000508416 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms