RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
SNCAIP-209ENST00000508017 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
SNCAIP-209ENST00000508017 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
SNCAIP-209ENST00000508017 MT1GP13640 62 aa4.34□□□□□ -1.72
SNCAIP-209ENST00000508017 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
SNCAIP-209ENST00000508017 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
SNCAIP-209ENST00000508017 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
SNCAIP-209ENST00000508017 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
SNCAIP-209ENST00000508017 MT1MQ8N339 61 aa4.25□□□□□ -1.73
SNCAIP-209ENST00000508017 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
SNCAIP-209ENST00000508017 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SNCAIP-209ENST00000508017 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
SNCAIP-209ENST00000508017 KRTAP9-6A0A140TA67 174 aa4.14□□□□□ -1.75
SNCAIP-209ENST00000508017 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
SNCAIP-209ENST00000508017 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
SNCAIP-209ENST00000508017 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
SNCAIP-209ENST00000508017 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
SNCAIP-209ENST00000508017 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
SNCAIP-209ENST00000508017 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
SNCAIP-209ENST00000508017 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
SNCAIP-209ENST00000508017 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
SNCAIP-209ENST00000508017 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
SNCAIP-209ENST00000508017 MT1AP04731 61 aa3.89□□□□□ -1.79
SNCAIP-209ENST00000508017 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
SNCAIP-209ENST00000508017 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
SNCAIP-209ENST00000508017 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
SNCAIP-209ENST00000508017 KRTAP9-7A8MTY7 169 aa3.81□□□□□ -1.8
SNCAIP-209ENST00000508017 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
SNCAIP-209ENST00000508017 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
SNCAIP-209ENST00000508017 PRM1P04553 51 aa3.74□□□□□ -1.81
SNCAIP-209ENST00000508017 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
SNCAIP-209ENST00000508017 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.84
SNCAIP-209ENST00000508017 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.84
SNCAIP-209ENST00000508017 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
SNCAIP-209ENST00000508017 SPRR2EP22531 72 aa3.57□□□□□ -1.84
SNCAIP-209ENST00000508017 SPRR2BP35325 72 aa3.57□□□□□ -1.84
SNCAIP-209ENST00000508017 SPRR2AP35326 72 aa3.57□□□□□ -1.84
SNCAIP-209ENST00000508017 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
SNCAIP-209ENST00000508017 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
SNCAIP-209ENST00000508017 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
SNCAIP-209ENST00000508017 MT3P25713 68 aa3.41□□□□□ -1.86
SNCAIP-209ENST00000508017 SPRR2DP22532 72 aa3.4□□□□□ -1.86
SNCAIP-209ENST00000508017 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
SNCAIP-209ENST00000508017 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SNCAIP-209ENST00000508017 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
SNCAIP-209ENST00000508017 LCE1DQ5T752 114 aa3.28□□□□□ -1.89
SNCAIP-209ENST00000508017 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
SNCAIP-209ENST00000508017 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
SNCAIP-209ENST00000508017 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
SNCAIP-209ENST00000508017 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.9
SNCAIP-209ENST00000508017 NEBP20929 6669 aa3.09□□□□□ -1.91
SNCAIP-209ENST00000508017 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
SNCAIP-209ENST00000508017 MT4P47944 62 aa3.05□□□□□ -1.92
SNCAIP-209ENST00000508017 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
SNCAIP-209ENST00000508017 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
SNCAIP-209ENST00000508017 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
SNCAIP-209ENST00000508017 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
SNCAIP-209ENST00000508017 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
SNCAIP-209ENST00000508017 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
SNCAIP-209ENST00000508017 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
SNCAIP-209ENST00000508017 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SNCAIP-209ENST00000508017 LCE1EQ5T753 118 aa2.78□□□□□ -1.97
SNCAIP-209ENST00000508017 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
SNCAIP-209ENST00000508017 LCE1CQ5T751 118 aa2.58□□□□□ -2
SNCAIP-209ENST00000508017 LCE1FQ5T754 118 aa2.55□□□□□ -2
SNCAIP-209ENST00000508017 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
SNCAIP-209ENST00000508017 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SNCAIP-209ENST00000508017 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SNCAIP-209ENST00000508017 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SNCAIP-209ENST00000508017 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
SNCAIP-209ENST00000508017 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
SNCAIP-209ENST00000508017 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SNCAIP-209ENST00000508017 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SNCAIP-209ENST00000508017 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
SNCAIP-209ENST00000508017 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SNCAIP-209ENST00000508017 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
SNCAIP-209ENST00000508017 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
SNCAIP-209ENST00000508017 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms