RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
SEC24D-208ENST00000506622 TNP1P09430 55 aa5.02□□□□□ -1.61
SEC24D-208ENST00000506622 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
SEC24D-208ENST00000506622 A0A1B0GU69 56 aa4.99□□□□□ -1.61
SEC24D-208ENST00000506622 A8MU10 97 aa4.98□□□□□ -1.61
SEC24D-208ENST00000506622 COX7CP15954 63 aa4.95□□□□□ -1.62
SEC24D-208ENST00000506622 H7BZZ5 65 aa4.93□□□□□ -1.62
SEC24D-208ENST00000506622 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
SEC24D-208ENST00000506622 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
SEC24D-208ENST00000506622 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
SEC24D-208ENST00000506622 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
SEC24D-208ENST00000506622 KRTAP20-2Q3LI61 65 aa4.81□□□□□ -1.64
SEC24D-208ENST00000506622 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
SEC24D-208ENST00000506622 PRR15LQ9BU68 103 aa4.78□□□□□ -1.64
SEC24D-208ENST00000506622 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
SEC24D-208ENST00000506622 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
SEC24D-208ENST00000506622 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
SEC24D-208ENST00000506622 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
SEC24D-208ENST00000506622 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
SEC24D-208ENST00000506622 ANAPC13Q9BS18 74 aa4.65□□□□□ -1.67
SEC24D-208ENST00000506622 V9GYY9 64 aa4.65□□□□□ -1.67
SEC24D-208ENST00000506622 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
SEC24D-208ENST00000506622 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
SEC24D-208ENST00000506622 UQCR11O14957 56 aa4.61□□□□□ -1.67
SEC24D-208ENST00000506622 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
SEC24D-208ENST00000506622 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
SEC24D-208ENST00000506622 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
SEC24D-208ENST00000506622 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
SEC24D-208ENST00000506622 K7ERS5 55 aa4.47□□□□□ -1.69
SEC24D-208ENST00000506622 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.69
SEC24D-208ENST00000506622 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.69
SEC24D-208ENST00000506622 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.69
SEC24D-208ENST00000506622 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
SEC24D-208ENST00000506622 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
SEC24D-208ENST00000506622 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
SEC24D-208ENST00000506622 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
SEC24D-208ENST00000506622 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
SEC24D-208ENST00000506622 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
SEC24D-208ENST00000506622 MT1AP04731 61 aa4.38□□□□□ -1.71
SEC24D-208ENST00000506622 MUC5BQ9HC84 5762 aaPredicted RBP4.37□□□□□ -1.71
SEC24D-208ENST00000506622 TMEM258P61165 79 aa4.37□□□□□ -1.71
SEC24D-208ENST00000506622 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
SEC24D-208ENST00000506622 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
SEC24D-208ENST00000506622 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
SEC24D-208ENST00000506622 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
SEC24D-208ENST00000506622 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
SEC24D-208ENST00000506622 PSPHP1O15172 72 aa4.24□□□□□ -1.73
SEC24D-208ENST00000506622 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
SEC24D-208ENST00000506622 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
SEC24D-208ENST00000506622 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
SEC24D-208ENST00000506622 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
SEC24D-208ENST00000506622 Q1T7F1 81 aa4.17□□□□□ -1.74
SEC24D-208ENST00000506622 A6NED7 52 aa4.1□□□□□ -1.75
SEC24D-208ENST00000506622 ROMO1P60602 79 aa4.09□□□□□ -1.75
SEC24D-208ENST00000506622 MT3P25713 68 aa4.04□□□□□ -1.76
SEC24D-208ENST00000506622 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
SEC24D-208ENST00000506622 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
SEC24D-208ENST00000506622 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
SEC24D-208ENST00000506622 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
SEC24D-208ENST00000506622 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
SEC24D-208ENST00000506622 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
SEC24D-208ENST00000506622 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SEC24D-208ENST00000506622 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
SEC24D-208ENST00000506622 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
SEC24D-208ENST00000506622 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
SEC24D-208ENST00000506622 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
SEC24D-208ENST00000506622 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SEC24D-208ENST00000506622 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
SEC24D-208ENST00000506622 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
SEC24D-208ENST00000506622 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SEC24D-208ENST00000506622 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SEC24D-208ENST00000506622 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
SEC24D-208ENST00000506622 INE1O15225 51 aa2.84□□□□□ -1.96
SEC24D-208ENST00000506622 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SEC24D-208ENST00000506622 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SEC24D-208ENST00000506622 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SEC24D-208ENST00000506622 PRM1P04553 51 aa2.07□□□□□ -2.08
SEC24D-208ENST00000506622 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 117.5 ms