RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
SMIM20-201ENST00000506197 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
SMIM20-201ENST00000506197 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
SMIM20-201ENST00000506197 KRTAP19-7Q3SYF9 63 aa7.46□□□□□ -1.22
SMIM20-201ENST00000506197 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
SMIM20-201ENST00000506197 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
SMIM20-201ENST00000506197 MT1EP04732 61 aa7.38□□□□□ -1.23
SMIM20-201ENST00000506197 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
SMIM20-201ENST00000506197 KRTAP19-3Q7Z4W3 81 aa7.2□□□□□ -1.26
SMIM20-201ENST00000506197 MT1LQ93083 61 aa7.16□□□□□ -1.26
SMIM20-201ENST00000506197 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
SMIM20-201ENST00000506197 MT1GP13640 62 aa7.1□□□□□ -1.27
SMIM20-201ENST00000506197 DSTQ03001 7570 aaKnown RBP7.09□□□□□ -1.27
SMIM20-201ENST00000506197 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
SMIM20-201ENST00000506197 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
SMIM20-201ENST00000506197 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
SMIM20-201ENST00000506197 PRAC1Q96KF2 57 aa7.07□□□□□ -1.28
SMIM20-201ENST00000506197 KTN1-AS1Q86SY8 53 aa7.06□□□□□ -1.28
SMIM20-201ENST00000506197 MT1MQ8N339 61 aa7□□□□□ -1.29
SMIM20-201ENST00000506197 KRTAP19-4Q3LI73 84 aa6.95□□□□□ -1.3
SMIM20-201ENST00000506197 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.3
SMIM20-201ENST00000506197 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
SMIM20-201ENST00000506197 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
SMIM20-201ENST00000506197 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
SMIM20-201ENST00000506197 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
SMIM20-201ENST00000506197 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
SMIM20-201ENST00000506197 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
SMIM20-201ENST00000506197 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
SMIM20-201ENST00000506197 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
SMIM20-201ENST00000506197 MT4P47944 62 aa6.65□□□□□ -1.34
SMIM20-201ENST00000506197 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
SMIM20-201ENST00000506197 AHNAK2Q8IVF2 5795 aa6.52□□□□□ -1.37
SMIM20-201ENST00000506197 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
SMIM20-201ENST00000506197 KRTAP5-5Q701N2 237 aaPredicted RBP6.32□□□□□ -1.4
SMIM20-201ENST00000506197 KRTAP5-10Q6L8G5 202 aa6.31□□□□□ -1.4
SMIM20-201ENST00000506197 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
SMIM20-201ENST00000506197 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
SMIM20-201ENST00000506197 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
SMIM20-201ENST00000506197 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
SMIM20-201ENST00000506197 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
SMIM20-201ENST00000506197 MT1AP04731 61 aa6.11□□□□□ -1.43
SMIM20-201ENST00000506197 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
SMIM20-201ENST00000506197 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.43
SMIM20-201ENST00000506197 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
SMIM20-201ENST00000506197 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
SMIM20-201ENST00000506197 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
SMIM20-201ENST00000506197 LUZP6Q538Z0 58 aa5.93□□□□□ -1.46
SMIM20-201ENST00000506197 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
SMIM20-201ENST00000506197 H3BS24 57 aa5.71□□□□□ -1.5
SMIM20-201ENST00000506197 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
SMIM20-201ENST00000506197 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
SMIM20-201ENST00000506197 MT3P25713 68 aa5.58□□□□□ -1.52
SMIM20-201ENST00000506197 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
SMIM20-201ENST00000506197 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
SMIM20-201ENST00000506197 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
SMIM20-201ENST00000506197 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
SMIM20-201ENST00000506197 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
SMIM20-201ENST00000506197 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
SMIM20-201ENST00000506197 MUC5ACP98088 5654 aa5.33□□□□□ -1.56
SMIM20-201ENST00000506197 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
SMIM20-201ENST00000506197 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
SMIM20-201ENST00000506197 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
SMIM20-201ENST00000506197 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
SMIM20-201ENST00000506197 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
SMIM20-201ENST00000506197 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
SMIM20-201ENST00000506197 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
SMIM20-201ENST00000506197 INE1O15225 51 aa4.45□□□□□ -1.7
SMIM20-201ENST00000506197 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
SMIM20-201ENST00000506197 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
SMIM20-201ENST00000506197 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
SMIM20-201ENST00000506197 PRM1P04553 51 aa4.01□□□□□ -1.77
SMIM20-201ENST00000506197 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
SMIM20-201ENST00000506197 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
SMIM20-201ENST00000506197 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SMIM20-201ENST00000506197 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
SMIM20-201ENST00000506197 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
SMIM20-201ENST00000506197 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 71.2 ms