RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 MMP24-AS1A0A0U1RRL7 71 aa2.4□□□□□ -2.03
NIPBL-205ENST00000505998 MUC2Q02817 5179 aa2.38□□□□□ -2.03
NIPBL-205ENST00000505998 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
NIPBL-205ENST00000505998 FLGP20930 4061 aaPredicted RBP2.36□□□□□ -2.03
NIPBL-205ENST00000505998 C9orf92A6NGG3 77 aa2.35□□□□□ -2.03
NIPBL-205ENST00000505998 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
NIPBL-205ENST00000505998 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
NIPBL-205ENST00000505998 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
NIPBL-205ENST00000505998 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
NIPBL-205ENST00000505998 H0YAA0 97 aa2.32□□□□□ -2.04
NIPBL-205ENST00000505998 CRIPTQ9P021 101 aa2.29□□□□□ -2.04
NIPBL-205ENST00000505998 COX6B2Q6YFQ2 88 aa2.28□□□□□ -2.04
NIPBL-205ENST00000505998 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
NIPBL-205ENST00000505998 PLAC4Q8WY50 150 aa2.25□□□□□ -2.05
NIPBL-205ENST00000505998 MT1HP80294 61 aa2.24□□□□□ -2.05
NIPBL-205ENST00000505998 INE1O15225 51 aa2.22□□□□□ -2.05
NIPBL-205ENST00000505998 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
NIPBL-205ENST00000505998 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
NIPBL-205ENST00000505998 MT2AP02795 61 aa2.12□□□□□ -2.07
NIPBL-205ENST00000505998 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
NIPBL-205ENST00000505998 S4R3F8 94 aa2.11□□□□□ -2.07
NIPBL-205ENST00000505998 MT1FP04733 61 aa2.1□□□□□ -2.07
NIPBL-205ENST00000505998 M0R2T5 61 aa2.08□□□□□ -2.08
NIPBL-205ENST00000505998 KRTAP13-4Q3LI77 160 aa2.08□□□□□ -2.08
NIPBL-205ENST00000505998 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
NIPBL-205ENST00000505998 USH2AO75445 5202 aa2.05□□□□□ -2.08
NIPBL-205ENST00000505998 KRTAP19-8Q3LI54 63 aa2.03□□□□□ -2.08
NIPBL-205ENST00000505998 A0A0D9SG42 100 aa2.01□□□□□ -2.09
NIPBL-205ENST00000505998 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
NIPBL-205ENST00000505998 MT1BP07438 61 aa1.99□□□□□ -2.09
NIPBL-205ENST00000505998 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
NIPBL-205ENST00000505998 FSIP2Q5CZC0 6907 aa1.98□□□□□ -2.09
NIPBL-205ENST00000505998 M0QZ58 72 aa1.96□□□□□ -2.1
NIPBL-205ENST00000505998 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
NIPBL-205ENST00000505998 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
NIPBL-205ENST00000505998 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
NIPBL-205ENST00000505998 MT1XP80297 61 aa1.89□□□□□ -2.11
NIPBL-205ENST00000505998 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
NIPBL-205ENST00000505998 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
NIPBL-205ENST00000505998 KMT2DO14686 5537 aa1.77□□□□□ -2.13
NIPBL-205ENST00000505998 NEBP20929 6669 aa1.74□□□□□ -2.13
NIPBL-205ENST00000505998 TNP1P09430 55 aa1.72□□□□□ -2.13
NIPBL-205ENST00000505998 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
NIPBL-205ENST00000505998 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
NIPBL-205ENST00000505998 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
NIPBL-205ENST00000505998 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
NIPBL-205ENST00000505998 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
NIPBL-205ENST00000505998 MT1EP04732 61 aa1.67□□□□□ -2.14
NIPBL-205ENST00000505998 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
NIPBL-205ENST00000505998 KRTAP19-5Q3LI72 72 aa1.63□□□□□ -2.15
NIPBL-205ENST00000505998 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
NIPBL-205ENST00000505998 MT1LQ93083 61 aa1.61□□□□□ -2.15
NIPBL-205ENST00000505998 MT1GP13640 62 aa1.6□□□□□ -2.15
NIPBL-205ENST00000505998 SPRR2EP22531 72 aa1.59□□□□□ -2.15
NIPBL-205ENST00000505998 SPRR2BP35325 72 aa1.59□□□□□ -2.15
NIPBL-205ENST00000505998 SPRR2AP35326 72 aa1.59□□□□□ -2.15
NIPBL-205ENST00000505998 KRTAP20-1Q3LI63 56 aa1.59□□□□□ -2.15
NIPBL-205ENST00000505998 MT1MQ8N339 61 aa1.57□□□□□ -2.16
NIPBL-205ENST00000505998 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
NIPBL-205ENST00000505998 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
NIPBL-205ENST00000505998 SPRR2DP22532 72 aa1.54□□□□□ -2.16
NIPBL-205ENST00000505998 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
NIPBL-205ENST00000505998 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
NIPBL-205ENST00000505998 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
NIPBL-205ENST00000505998 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
NIPBL-205ENST00000505998 MT1AP04731 61 aa1.38□□□□□ -2.19
NIPBL-205ENST00000505998 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.19
NIPBL-205ENST00000505998 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
NIPBL-205ENST00000505998 MT4P47944 62 aa1.3□□□□□ -2.2
NIPBL-205ENST00000505998 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
NIPBL-205ENST00000505998 PRM1P04553 51 aa1.26□□□□□ -2.21
NIPBL-205ENST00000505998 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
NIPBL-205ENST00000505998 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
NIPBL-205ENST00000505998 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
NIPBL-205ENST00000505998 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
NIPBL-205ENST00000505998 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
NIPBL-205ENST00000505998 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
NIPBL-205ENST00000505998 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 52.8 ms