RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 MT1EP04732 61 aa4.5□□□□□ -1.69
PDLIM7-214ENST00000505746 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
PDLIM7-214ENST00000505746 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
PDLIM7-214ENST00000505746 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
PDLIM7-214ENST00000505746 ROMO1P60602 79 aa4.4□□□□□ -1.71
PDLIM7-214ENST00000505746 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.71
PDLIM7-214ENST00000505746 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
PDLIM7-214ENST00000505746 MT1GP13640 62 aa4.39□□□□□ -1.71
PDLIM7-214ENST00000505746 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
PDLIM7-214ENST00000505746 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
PDLIM7-214ENST00000505746 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
PDLIM7-214ENST00000505746 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
PDLIM7-214ENST00000505746 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
PDLIM7-214ENST00000505746 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
PDLIM7-214ENST00000505746 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
PDLIM7-214ENST00000505746 MT1MQ8N339 61 aa4.29□□□□□ -1.72
PDLIM7-214ENST00000505746 MT1LQ93083 61 aa4.27□□□□□ -1.73
PDLIM7-214ENST00000505746 MT4P47944 62 aa4.25□□□□□ -1.73
PDLIM7-214ENST00000505746 TNP1P09430 55 aa4.24□□□□□ -1.73
PDLIM7-214ENST00000505746 KRTAP25-1Q3LHN0 102 aa4.22□□□□□ -1.73
PDLIM7-214ENST00000505746 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
PDLIM7-214ENST00000505746 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.73
PDLIM7-214ENST00000505746 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
PDLIM7-214ENST00000505746 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
PDLIM7-214ENST00000505746 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
PDLIM7-214ENST00000505746 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
PDLIM7-214ENST00000505746 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
PDLIM7-214ENST00000505746 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
PDLIM7-214ENST00000505746 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
PDLIM7-214ENST00000505746 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
PDLIM7-214ENST00000505746 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
PDLIM7-214ENST00000505746 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
PDLIM7-214ENST00000505746 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
PDLIM7-214ENST00000505746 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
PDLIM7-214ENST00000505746 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
PDLIM7-214ENST00000505746 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
PDLIM7-214ENST00000505746 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
PDLIM7-214ENST00000505746 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
PDLIM7-214ENST00000505746 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
PDLIM7-214ENST00000505746 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
PDLIM7-214ENST00000505746 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
PDLIM7-214ENST00000505746 MT1AP04731 61 aa3.65□□□□□ -1.83
PDLIM7-214ENST00000505746 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
PDLIM7-214ENST00000505746 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
PDLIM7-214ENST00000505746 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
PDLIM7-214ENST00000505746 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
PDLIM7-214ENST00000505746 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
PDLIM7-214ENST00000505746 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
PDLIM7-214ENST00000505746 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
PDLIM7-214ENST00000505746 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
PDLIM7-214ENST00000505746 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
PDLIM7-214ENST00000505746 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
PDLIM7-214ENST00000505746 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
PDLIM7-214ENST00000505746 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
PDLIM7-214ENST00000505746 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
PDLIM7-214ENST00000505746 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
PDLIM7-214ENST00000505746 MT3P25713 68 aa3.36□□□□□ -1.87
PDLIM7-214ENST00000505746 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
PDLIM7-214ENST00000505746 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PDLIM7-214ENST00000505746 H3BS24 57 aa3.02□□□□□ -1.93
PDLIM7-214ENST00000505746 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
PDLIM7-214ENST00000505746 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
PDLIM7-214ENST00000505746 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
PDLIM7-214ENST00000505746 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
PDLIM7-214ENST00000505746 INE1O15225 51 aa2.76□□□□□ -1.97
PDLIM7-214ENST00000505746 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
PDLIM7-214ENST00000505746 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
PDLIM7-214ENST00000505746 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
PDLIM7-214ENST00000505746 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
PDLIM7-214ENST00000505746 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PDLIM7-214ENST00000505746 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
PDLIM7-214ENST00000505746 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
PDLIM7-214ENST00000505746 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
PDLIM7-214ENST00000505746 PRM1P04553 51 aa2.35□□□□□ -2.03
PDLIM7-214ENST00000505746 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
PDLIM7-214ENST00000505746 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
PDLIM7-214ENST00000505746 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
PDLIM7-214ENST00000505746 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 221.1 ms