RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
LIN54-204ENST00000505397 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
LIN54-204ENST00000505397 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
LIN54-204ENST00000505397 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
LIN54-204ENST00000505397 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
LIN54-204ENST00000505397 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
LIN54-204ENST00000505397 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
LIN54-204ENST00000505397 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
LIN54-204ENST00000505397 MT1GP13640 62 aa5.62□□□□□ -1.51
LIN54-204ENST00000505397 MT1MQ8N339 61 aa5.56□□□□□ -1.52
LIN54-204ENST00000505397 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
LIN54-204ENST00000505397 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
LIN54-204ENST00000505397 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
LIN54-204ENST00000505397 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
LIN54-204ENST00000505397 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
LIN54-204ENST00000505397 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
LIN54-204ENST00000505397 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
LIN54-204ENST00000505397 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
LIN54-204ENST00000505397 MDN1Q9NU22 5596 aa5.35□□□□□ -1.55
LIN54-204ENST00000505397 SPRR2EP22531 72 aa5.35□□□□□ -1.55
LIN54-204ENST00000505397 SPRR2BP35325 72 aa5.35□□□□□ -1.55
LIN54-204ENST00000505397 SPRR2AP35326 72 aa5.35□□□□□ -1.55
LIN54-204ENST00000505397 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
LIN54-204ENST00000505397 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
LIN54-204ENST00000505397 SPRR2DP22532 72 aa5.15□□□□□ -1.58
LIN54-204ENST00000505397 KRTAP12-4P60329 112 aa5.09□□□□□ -1.6
LIN54-204ENST00000505397 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
LIN54-204ENST00000505397 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
LIN54-204ENST00000505397 MT1AP04731 61 aa4.96□□□□□ -1.61
LIN54-204ENST00000505397 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
LIN54-204ENST00000505397 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
LIN54-204ENST00000505397 NEBP20929 6669 aa4.9□□□□□ -1.62
LIN54-204ENST00000505397 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
LIN54-204ENST00000505397 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
LIN54-204ENST00000505397 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
LIN54-204ENST00000505397 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
LIN54-204ENST00000505397 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
LIN54-204ENST00000505397 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
LIN54-204ENST00000505397 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
LIN54-204ENST00000505397 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
LIN54-204ENST00000505397 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
LIN54-204ENST00000505397 PRM1P04553 51 aa4.5□□□□□ -1.69
LIN54-204ENST00000505397 MT3P25713 68 aa4.49□□□□□ -1.69
LIN54-204ENST00000505397 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
LIN54-204ENST00000505397 MT4P47944 62 aa4.48□□□□□ -1.69
LIN54-204ENST00000505397 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
LIN54-204ENST00000505397 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
LIN54-204ENST00000505397 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
LIN54-204ENST00000505397 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
LIN54-204ENST00000505397 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
LIN54-204ENST00000505397 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
LIN54-204ENST00000505397 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
LIN54-204ENST00000505397 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
LIN54-204ENST00000505397 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
LIN54-204ENST00000505397 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
LIN54-204ENST00000505397 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
LIN54-204ENST00000505397 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
LIN54-204ENST00000505397 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
LIN54-204ENST00000505397 KRTAP5-10Q6L8G5 202 aa3.59□□□□□ -1.83
LIN54-204ENST00000505397 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
LIN54-204ENST00000505397 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
LIN54-204ENST00000505397 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
LIN54-204ENST00000505397 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
LIN54-204ENST00000505397 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
LIN54-204ENST00000505397 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
LIN54-204ENST00000505397 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
LIN54-204ENST00000505397 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
LIN54-204ENST00000505397 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
LIN54-204ENST00000505397 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
LIN54-204ENST00000505397 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
LIN54-204ENST00000505397 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
LIN54-204ENST00000505397 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
LIN54-204ENST00000505397 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
LIN54-204ENST00000505397 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
LIN54-204ENST00000505397 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
LIN54-204ENST00000505397 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
LIN54-204ENST00000505397 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 164.8 ms