RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 KRTAP19-7Q3SYF9 63 aa9.05□□□□□ -0.96
DHFR-203ENST00000505337 SPRR2FQ96RM1 72 aa9.04□□□□□ -0.96
DHFR-203ENST00000505337 LUZP6Q538Z0 58 aa8.96□□□□□ -0.98
DHFR-203ENST00000505337 SPRR2EP22531 72 aa8.85□□□□□ -0.99
DHFR-203ENST00000505337 SPRR2BP35325 72 aa8.85□□□□□ -0.99
DHFR-203ENST00000505337 SPRR2AP35326 72 aa8.85□□□□□ -0.99
DHFR-203ENST00000505337 MT1EP04732 61 aa8.85□□□□□ -0.99
DHFR-203ENST00000505337 KRTAP20-1Q3LI63 56 aa8.84□□□□□ -0.99
DHFR-203ENST00000505337 LCE1AQ5T7P2 110 aa8.8□□□□□ -1
DHFR-203ENST00000505337 LCE3CQ5T5A8 94 aa8.79□□□□□ -1
DHFR-203ENST00000505337 MT1LQ93083 61 aa8.72□□□□□ -1.01
DHFR-203ENST00000505337 KRTAP19-4Q3LI73 84 aa8.68□□□□□ -1.02
DHFR-203ENST00000505337 KRTAP2-3P0C7H8 128 aa8.66□□□□□ -1.02
DHFR-203ENST00000505337 KRTAP2-4Q9BYR9 128 aa8.66□□□□□ -1.02
DHFR-203ENST00000505337 SPRR2DP22532 72 aa8.56□□□□□ -1.04
DHFR-203ENST00000505337 H3BS24 57 aa8.53□□□□□ -1.04
DHFR-203ENST00000505337 KRTAP4-7Q9BYR0 210 aa8.51□□□□□ -1.05
DHFR-203ENST00000505337 KRTAP19-3Q7Z4W3 81 aa8.42□□□□□ -1.06
DHFR-203ENST00000505337 KRTAP2-2Q9BYT5 123 aa8.4□□□□□ -1.06
DHFR-203ENST00000505337 KRTAP2-1Q9BYU5 128 aa8.4□□□□□ -1.06
DHFR-203ENST00000505337 KRTAP9-6A8MVA2 160 aa8.4□□□□□ -1.07
DHFR-203ENST00000505337 MT1GP13640 62 aa8.34□□□□□ -1.07
DHFR-203ENST00000505337 LCE3BQ5TA77 95 aa8.32□□□□□ -1.08
DHFR-203ENST00000505337 MT1MQ8N339 61 aa8.31□□□□□ -1.08
DHFR-203ENST00000505337 LCE5AQ5TCM9 118 aa8.29□□□□□ -1.08
DHFR-203ENST00000505337 KRTAP4-3Q9BYR4 195 aa8.18□□□□□ -1.1
DHFR-203ENST00000505337 DSTQ03001 7570 aaKnown RBP8.09□□□□□ -1.11
DHFR-203ENST00000505337 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
DHFR-203ENST00000505337 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
DHFR-203ENST00000505337 KRTAP4-9Q9BYQ8 210 aa7.72□□□□□ -1.17
DHFR-203ENST00000505337 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
DHFR-203ENST00000505337 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
DHFR-203ENST00000505337 KRTAP5-4Q6L8H1 288 aa7.52□□□□□ -1.21
DHFR-203ENST00000505337 KRTAP5-5Q701N2 237 aaPredicted RBP7.49□□□□□ -1.21
DHFR-203ENST00000505337 MT4P47944 62 aa7.48□□□□□ -1.21
DHFR-203ENST00000505337 HMCN1Q96RW7 5635 aa7.45□□□□□ -1.22
DHFR-203ENST00000505337 INE1O15225 51 aa7.44□□□□□ -1.22
DHFR-203ENST00000505337 MT1AP04731 61 aa7.4□□□□□ -1.23
DHFR-203ENST00000505337 KRTAP6-1Q3LI64 71 aa7.35□□□□□ -1.23
DHFR-203ENST00000505337 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
DHFR-203ENST00000505337 GPR98Q8WXG9 6306 aa7.26□□□□□ -1.25
DHFR-203ENST00000505337 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
DHFR-203ENST00000505337 AHNAK2Q8IVF2 5795 aa7.06□□□□□ -1.28
DHFR-203ENST00000505337 KRTAP12-4P60329 112 aa7.01□□□□□ -1.29
DHFR-203ENST00000505337 SYNE1Q8NF91 8797 aaKnown RBP7.01□□□□□ -1.29
DHFR-203ENST00000505337 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
DHFR-203ENST00000505337 KRTAP5-10Q6L8G5 202 aa6.95□□□□□ -1.3
DHFR-203ENST00000505337 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
DHFR-203ENST00000505337 KRTAP6-2Q3LI66 62 aa6.7□□□□□ -1.34
DHFR-203ENST00000505337 MT3P25713 68 aa6.64□□□□□ -1.35
DHFR-203ENST00000505337 KRTAP5-7Q6L8G8 165 aa6.63□□□□□ -1.35
DHFR-203ENST00000505337 LCE3DQ9BYE3 92 aa6.63□□□□□ -1.35
DHFR-203ENST00000505337 KRTAP5-2Q701N4 177 aa6.61□□□□□ -1.35
DHFR-203ENST00000505337 LCE3EQ5T5B0 92 aa6.49□□□□□ -1.37
DHFR-203ENST00000505337 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
DHFR-203ENST00000505337 KRTAP5-8O75690 187 aa6.21□□□□□ -1.42
DHFR-203ENST00000505337 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
DHFR-203ENST00000505337 KRTAP5-1Q6L8H4 278 aa5.91□□□□□ -1.46
DHFR-203ENST00000505337 PRM1P04553 51 aa5.85□□□□□ -1.47
DHFR-203ENST00000505337 MUC5BQ9HC84 5762 aaPredicted RBP5.83□□□□□ -1.48
DHFR-203ENST00000505337 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
DHFR-203ENST00000505337 MUC5ACP98088 5654 aa5.78□□□□□ -1.48
DHFR-203ENST00000505337 AHNAKQ09666 5890 aaKnown RBP5.71□□□□□ -1.5
DHFR-203ENST00000505337 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
DHFR-203ENST00000505337 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
DHFR-203ENST00000505337 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
DHFR-203ENST00000505337 LCE1CQ5T751 118 aa5.33□□□□□ -1.56
DHFR-203ENST00000505337 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
DHFR-203ENST00000505337 KRTAP21-2Q3LI59 83 aa4.81□□□□□ -1.64
DHFR-203ENST00000505337 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
DHFR-203ENST00000505337 KRTAP5-11Q6L8G4 156 aa4.77□□□□□ -1.65
DHFR-203ENST00000505337 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
DHFR-203ENST00000505337 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
DHFR-203ENST00000505337 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
DHFR-203ENST00000505337 MUC19Q7Z5P9 8384 aa3.76□□□□□ -1.81
DHFR-203ENST00000505337 KRTAP21-1Q3LI58 79 aa3.65□□□□□ -1.82
DHFR-203ENST00000505337 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 8 ms