RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
CAST-213ENST00000504465 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
CAST-213ENST00000504465 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
CAST-213ENST00000504465 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
CAST-213ENST00000504465 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
CAST-213ENST00000504465 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
CAST-213ENST00000504465 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
CAST-213ENST00000504465 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
CAST-213ENST00000504465 MT1LQ93083 61 aa3.1□□□□□ -1.91
CAST-213ENST00000504465 MT1EP04732 61 aa3.09□□□□□ -1.91
CAST-213ENST00000504465 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
CAST-213ENST00000504465 SSPOA2VEC9 5147 aa3.05□□□□□ -1.92
CAST-213ENST00000504465 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
CAST-213ENST00000504465 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
CAST-213ENST00000504465 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
CAST-213ENST00000504465 MT1GP13640 62 aa2.9□□□□□ -1.95
CAST-213ENST00000504465 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
CAST-213ENST00000504465 MT1MQ8N339 61 aa2.88□□□□□ -1.95
CAST-213ENST00000504465 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
CAST-213ENST00000504465 KRTAP9-7A8MTY7 169 aa2.87□□□□□ -1.95
CAST-213ENST00000504465 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
CAST-213ENST00000504465 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
CAST-213ENST00000504465 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.96
CAST-213ENST00000504465 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
CAST-213ENST00000504465 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
CAST-213ENST00000504465 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
CAST-213ENST00000504465 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
CAST-213ENST00000504465 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
CAST-213ENST00000504465 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
CAST-213ENST00000504465 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
CAST-213ENST00000504465 MT1AP04731 61 aa2.63□□□□□ -1.99
CAST-213ENST00000504465 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -2
CAST-213ENST00000504465 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
CAST-213ENST00000504465 MDN1Q9NU22 5596 aa2.56□□□□□ -2
CAST-213ENST00000504465 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
CAST-213ENST00000504465 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
CAST-213ENST00000504465 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CAST-213ENST00000504465 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
CAST-213ENST00000504465 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
CAST-213ENST00000504465 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
CAST-213ENST00000504465 SPRR2EP22531 72 aa2.44□□□□□ -2.02
CAST-213ENST00000504465 SPRR2BP35325 72 aa2.44□□□□□ -2.02
CAST-213ENST00000504465 SPRR2AP35326 72 aa2.44□□□□□ -2.02
CAST-213ENST00000504465 PRM1P04553 51 aa2.43□□□□□ -2.02
CAST-213ENST00000504465 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CAST-213ENST00000504465 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
CAST-213ENST00000504465 SPRR2DP22532 72 aa2.33□□□□□ -2.04
CAST-213ENST00000504465 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
CAST-213ENST00000504465 MT3P25713 68 aa2.31□□□□□ -2.04
CAST-213ENST00000504465 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
CAST-213ENST00000504465 NEBP20929 6669 aa2.24□□□□□ -2.05
CAST-213ENST00000504465 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
CAST-213ENST00000504465 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
CAST-213ENST00000504465 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
CAST-213ENST00000504465 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
CAST-213ENST00000504465 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
CAST-213ENST00000504465 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
CAST-213ENST00000504465 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
CAST-213ENST00000504465 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
CAST-213ENST00000504465 MT4P47944 62 aa2.06□□□□□ -2.08
CAST-213ENST00000504465 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CAST-213ENST00000504465 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
CAST-213ENST00000504465 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
CAST-213ENST00000504465 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CAST-213ENST00000504465 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
CAST-213ENST00000504465 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
CAST-213ENST00000504465 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
CAST-213ENST00000504465 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
CAST-213ENST00000504465 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
CAST-213ENST00000504465 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
CAST-213ENST00000504465 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CAST-213ENST00000504465 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
CAST-213ENST00000504465 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
CAST-213ENST00000504465 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
CAST-213ENST00000504465 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
CAST-213ENST00000504465 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CAST-213ENST00000504465 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 160.5 ms