RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
DHFR-202ENST00000504396 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
DHFR-202ENST00000504396 SPRR2EP22531 72 aa3.96□□□□□ -1.77
DHFR-202ENST00000504396 SPRR2BP35325 72 aa3.96□□□□□ -1.77
DHFR-202ENST00000504396 SPRR2AP35326 72 aa3.96□□□□□ -1.77
DHFR-202ENST00000504396 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.77
DHFR-202ENST00000504396 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
DHFR-202ENST00000504396 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
DHFR-202ENST00000504396 H0YAA0 97 aa3.94□□□□□ -1.78
DHFR-202ENST00000504396 ROMO1P60602 79 aa3.9□□□□□ -1.78
DHFR-202ENST00000504396 A0A1B0GU33 70 aa3.89□□□□□ -1.79
DHFR-202ENST00000504396 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
DHFR-202ENST00000504396 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
DHFR-202ENST00000504396 K7ERS5 55 aa3.87□□□□□ -1.79
DHFR-202ENST00000504396 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
DHFR-202ENST00000504396 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
DHFR-202ENST00000504396 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
DHFR-202ENST00000504396 SPRR2DP22532 72 aa3.84□□□□□ -1.79
DHFR-202ENST00000504396 MT1XP80297 61 aa3.78□□□□□ -1.8
DHFR-202ENST00000504396 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
DHFR-202ENST00000504396 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
DHFR-202ENST00000504396 P0C880 135 aa3.75□□□□□ -1.81
DHFR-202ENST00000504396 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
DHFR-202ENST00000504396 R4GN34 69 aa3.7□□□□□ -1.82
DHFR-202ENST00000504396 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
DHFR-202ENST00000504396 M0QZ58 72 aa3.65□□□□□ -1.83
DHFR-202ENST00000504396 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
DHFR-202ENST00000504396 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
DHFR-202ENST00000504396 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
DHFR-202ENST00000504396 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
DHFR-202ENST00000504396 A0A0D9SG42 100 aa3.57□□□□□ -1.84
DHFR-202ENST00000504396 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
DHFR-202ENST00000504396 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
DHFR-202ENST00000504396 KRTAP12-1P59990 96 aa3.55□□□□□ -1.84
DHFR-202ENST00000504396 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
DHFR-202ENST00000504396 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
DHFR-202ENST00000504396 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
DHFR-202ENST00000504396 MT4P47944 62 aa3.39□□□□□ -1.87
DHFR-202ENST00000504396 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
DHFR-202ENST00000504396 MT1EP04732 61 aa3.37□□□□□ -1.87
DHFR-202ENST00000504396 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
DHFR-202ENST00000504396 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
DHFR-202ENST00000504396 LUZP6Q538Z0 58 aa3.34□□□□□ -1.88
DHFR-202ENST00000504396 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
DHFR-202ENST00000504396 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
DHFR-202ENST00000504396 MT1GP13640 62 aa3.31□□□□□ -1.88
DHFR-202ENST00000504396 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
DHFR-202ENST00000504396 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
DHFR-202ENST00000504396 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
DHFR-202ENST00000504396 MT1MQ8N339 61 aa3.23□□□□□ -1.89
DHFR-202ENST00000504396 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
DHFR-202ENST00000504396 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
DHFR-202ENST00000504396 MT1LQ93083 61 aa3.18□□□□□ -1.9
DHFR-202ENST00000504396 TNP1P09430 55 aa3.12□□□□□ -1.91
DHFR-202ENST00000504396 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
DHFR-202ENST00000504396 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
DHFR-202ENST00000504396 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
DHFR-202ENST00000504396 INE1O15225 51 aa3.02□□□□□ -1.93
DHFR-202ENST00000504396 KRTAP12-4P60329 112 aa3□□□□□ -1.93
DHFR-202ENST00000504396 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
DHFR-202ENST00000504396 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
DHFR-202ENST00000504396 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
DHFR-202ENST00000504396 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
DHFR-202ENST00000504396 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
DHFR-202ENST00000504396 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
DHFR-202ENST00000504396 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
DHFR-202ENST00000504396 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
DHFR-202ENST00000504396 MT1AP04731 61 aa2.72□□□□□ -1.97
DHFR-202ENST00000504396 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
DHFR-202ENST00000504396 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
DHFR-202ENST00000504396 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
DHFR-202ENST00000504396 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
DHFR-202ENST00000504396 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
DHFR-202ENST00000504396 PRM1P04553 51 aa2□□□□□ -2.09
DHFR-202ENST00000504396 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
DHFR-202ENST00000504396 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
DHFR-202ENST00000504396 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms