RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
SDHA-204ENST00000504309 MT1MQ8N339 61 aa5.98□□□□□ -1.45
SDHA-204ENST00000504309 MT1GP13640 62 aa5.96□□□□□ -1.46
SDHA-204ENST00000504309 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
SDHA-204ENST00000504309 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
SDHA-204ENST00000504309 MACF1Q9UPN3 7388 aaKnown RBP5.94□□□□□ -1.46
SDHA-204ENST00000504309 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.47
SDHA-204ENST00000504309 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.47
SDHA-204ENST00000504309 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.47
SDHA-204ENST00000504309 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
SDHA-204ENST00000504309 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
SDHA-204ENST00000504309 INE1O15225 51 aa5.82□□□□□ -1.48
SDHA-204ENST00000504309 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
SDHA-204ENST00000504309 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
SDHA-204ENST00000504309 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
SDHA-204ENST00000504309 KRTAP5-9P26371 169 aa5.67□□□□□ -1.5
SDHA-204ENST00000504309 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
SDHA-204ENST00000504309 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
SDHA-204ENST00000504309 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
SDHA-204ENST00000504309 SPRR2EP22531 72 aa5.5□□□□□ -1.53
SDHA-204ENST00000504309 SPRR2BP35325 72 aa5.5□□□□□ -1.53
SDHA-204ENST00000504309 SPRR2AP35326 72 aa5.5□□□□□ -1.53
SDHA-204ENST00000504309 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
SDHA-204ENST00000504309 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
SDHA-204ENST00000504309 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
SDHA-204ENST00000504309 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
SDHA-204ENST00000504309 MT1AP04731 61 aa5.32□□□□□ -1.56
SDHA-204ENST00000504309 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
SDHA-204ENST00000504309 SPRR2DP22532 72 aa5.27□□□□□ -1.57
SDHA-204ENST00000504309 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
SDHA-204ENST00000504309 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
SDHA-204ENST00000504309 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
SDHA-204ENST00000504309 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
SDHA-204ENST00000504309 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
SDHA-204ENST00000504309 NEBP20929 6669 aa4.93□□□□□ -1.62
SDHA-204ENST00000504309 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
SDHA-204ENST00000504309 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
SDHA-204ENST00000504309 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
SDHA-204ENST00000504309 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
SDHA-204ENST00000504309 MT3P25713 68 aa4.77□□□□□ -1.65
SDHA-204ENST00000504309 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.66
SDHA-204ENST00000504309 MT4P47944 62 aa4.63□□□□□ -1.67
SDHA-204ENST00000504309 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
SDHA-204ENST00000504309 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
SDHA-204ENST00000504309 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
SDHA-204ENST00000504309 PRM1P04553 51 aa4.5□□□□□ -1.69
SDHA-204ENST00000504309 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
SDHA-204ENST00000504309 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
SDHA-204ENST00000504309 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SDHA-204ENST00000504309 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
SDHA-204ENST00000504309 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SDHA-204ENST00000504309 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
SDHA-204ENST00000504309 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
SDHA-204ENST00000504309 LCE1EQ5T753 118 aa4□□□□□ -1.77
SDHA-204ENST00000504309 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
SDHA-204ENST00000504309 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
SDHA-204ENST00000504309 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SDHA-204ENST00000504309 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
SDHA-204ENST00000504309 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
SDHA-204ENST00000504309 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
SDHA-204ENST00000504309 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
SDHA-204ENST00000504309 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
SDHA-204ENST00000504309 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SDHA-204ENST00000504309 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
SDHA-204ENST00000504309 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
SDHA-204ENST00000504309 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
SDHA-204ENST00000504309 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SDHA-204ENST00000504309 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
SDHA-204ENST00000504309 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SDHA-204ENST00000504309 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SDHA-204ENST00000504309 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SDHA-204ENST00000504309 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
SDHA-204ENST00000504309 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SDHA-204ENST00000504309 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
SDHA-204ENST00000504309 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
SDHA-204ENST00000504309 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
SDHA-204ENST00000504309 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 15.5 ms