RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 MT1GP13640 62 aa6.48□□□□□ -1.37
SH3TC1-208ENST00000504223 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
SH3TC1-208ENST00000504223 TNP1P09430 55 aa6.43□□□□□ -1.38
SH3TC1-208ENST00000504223 MT1LQ93083 61 aa6.43□□□□□ -1.38
SH3TC1-208ENST00000504223 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
SH3TC1-208ENST00000504223 MT1MQ8N339 61 aa6.4□□□□□ -1.38
SH3TC1-208ENST00000504223 KRTAP4-9Q9BYQ8 210 aa6.39□□□□□ -1.39
SH3TC1-208ENST00000504223 K7ERS5 55 aa6.33□□□□□ -1.4
SH3TC1-208ENST00000504223 GPR98Q8WXG9 6306 aa6.33□□□□□ -1.4
SH3TC1-208ENST00000504223 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
SH3TC1-208ENST00000504223 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
SH3TC1-208ENST00000504223 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
SH3TC1-208ENST00000504223 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
SH3TC1-208ENST00000504223 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
SH3TC1-208ENST00000504223 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
SH3TC1-208ENST00000504223 BRK1Q8WUW1 75 aa6.16□□□□□ -1.42
SH3TC1-208ENST00000504223 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
SH3TC1-208ENST00000504223 MT4P47944 62 aa6.15□□□□□ -1.42
SH3TC1-208ENST00000504223 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
SH3TC1-208ENST00000504223 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
SH3TC1-208ENST00000504223 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
SH3TC1-208ENST00000504223 ROMO1P60602 79 aa5.98□□□□□ -1.45
SH3TC1-208ENST00000504223 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
SH3TC1-208ENST00000504223 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
SH3TC1-208ENST00000504223 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
SH3TC1-208ENST00000504223 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
SH3TC1-208ENST00000504223 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
SH3TC1-208ENST00000504223 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
SH3TC1-208ENST00000504223 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
SH3TC1-208ENST00000504223 KRTAP20-2Q3LI61 65 aa5.78□□□□□ -1.48
SH3TC1-208ENST00000504223 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
SH3TC1-208ENST00000504223 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
SH3TC1-208ENST00000504223 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
SH3TC1-208ENST00000504223 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
SH3TC1-208ENST00000504223 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
SH3TC1-208ENST00000504223 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
SH3TC1-208ENST00000504223 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
SH3TC1-208ENST00000504223 KRTAP5-7Q6L8G8 165 aa5.61□□□□□ -1.51
SH3TC1-208ENST00000504223 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
SH3TC1-208ENST00000504223 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
SH3TC1-208ENST00000504223 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
SH3TC1-208ENST00000504223 MT1AP04731 61 aa5.45□□□□□ -1.54
SH3TC1-208ENST00000504223 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
SH3TC1-208ENST00000504223 KRTAP5-2Q701N4 177 aa5.37□□□□□ -1.55
SH3TC1-208ENST00000504223 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
SH3TC1-208ENST00000504223 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
SH3TC1-208ENST00000504223 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
SH3TC1-208ENST00000504223 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
SH3TC1-208ENST00000504223 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
SH3TC1-208ENST00000504223 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
SH3TC1-208ENST00000504223 MT3P25713 68 aa4.96□□□□□ -1.62
SH3TC1-208ENST00000504223 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
SH3TC1-208ENST00000504223 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
SH3TC1-208ENST00000504223 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
SH3TC1-208ENST00000504223 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
SH3TC1-208ENST00000504223 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
SH3TC1-208ENST00000504223 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
SH3TC1-208ENST00000504223 LUZP6Q538Z0 58 aa4.54□□□□□ -1.68
SH3TC1-208ENST00000504223 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SH3TC1-208ENST00000504223 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
SH3TC1-208ENST00000504223 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
SH3TC1-208ENST00000504223 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
SH3TC1-208ENST00000504223 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
SH3TC1-208ENST00000504223 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
SH3TC1-208ENST00000504223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
SH3TC1-208ENST00000504223 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
SH3TC1-208ENST00000504223 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
SH3TC1-208ENST00000504223 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
SH3TC1-208ENST00000504223 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
SH3TC1-208ENST00000504223 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
SH3TC1-208ENST00000504223 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
SH3TC1-208ENST00000504223 INE1O15225 51 aa3.38□□□□□ -1.87
SH3TC1-208ENST00000504223 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
SH3TC1-208ENST00000504223 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
SH3TC1-208ENST00000504223 PRM1P04553 51 aa3.1□□□□□ -1.91
SH3TC1-208ENST00000504223 H3BS24 57 aa2.95□□□□□ -1.94
SH3TC1-208ENST00000504223 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SH3TC1-208ENST00000504223 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms