RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
MATR3-208ENST00000504045 A0A0D9SG42 100 aa6.56□□□□□ -1.36
MATR3-208ENST00000504045 UQCR11O14957 56 aa6.56□□□□□ -1.36
MATR3-208ENST00000504045 SPRR2DP22532 72 aa6.52□□□□□ -1.37
MATR3-208ENST00000504045 A0A1B0GU33 70 aa6.51□□□□□ -1.37
MATR3-208ENST00000504045 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
MATR3-208ENST00000504045 LCE5AQ5TCM9 118 aa6.5□□□□□ -1.37
MATR3-208ENST00000504045 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
MATR3-208ENST00000504045 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
MATR3-208ENST00000504045 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
MATR3-208ENST00000504045 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
MATR3-208ENST00000504045 KRTAP2-2Q9BYT5 123 aa6.41□□□□□ -1.38
MATR3-208ENST00000504045 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
MATR3-208ENST00000504045 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
MATR3-208ENST00000504045 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
MATR3-208ENST00000504045 MT1EP04732 61 aa6.3□□□□□ -1.4
MATR3-208ENST00000504045 DSTQ03001 7570 aaKnown RBP6.23□□□□□ -1.41
MATR3-208ENST00000504045 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
MATR3-208ENST00000504045 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
MATR3-208ENST00000504045 K7ERS5 55 aa6.2□□□□□ -1.42
MATR3-208ENST00000504045 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
MATR3-208ENST00000504045 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
MATR3-208ENST00000504045 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
MATR3-208ENST00000504045 TNP1P09430 55 aa6.08□□□□□ -1.44
MATR3-208ENST00000504045 MT1GP13640 62 aa6.06□□□□□ -1.44
MATR3-208ENST00000504045 MT1LQ93083 61 aa6.03□□□□□ -1.44
MATR3-208ENST00000504045 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
MATR3-208ENST00000504045 MT1MQ8N339 61 aa5.99□□□□□ -1.45
MATR3-208ENST00000504045 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
MATR3-208ENST00000504045 ROMO1P60602 79 aa5.97□□□□□ -1.45
MATR3-208ENST00000504045 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
MATR3-208ENST00000504045 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
MATR3-208ENST00000504045 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
MATR3-208ENST00000504045 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
MATR3-208ENST00000504045 MT4P47944 62 aa5.72□□□□□ -1.49
MATR3-208ENST00000504045 HMCN1Q96RW7 5635 aa5.7□□□□□ -1.5
MATR3-208ENST00000504045 KRTAP5-4Q6L8H1 288 aa5.68□□□□□ -1.5
MATR3-208ENST00000504045 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
MATR3-208ENST00000504045 KRTAP5-5Q701N2 237 aaPredicted RBP5.49□□□□□ -1.53
MATR3-208ENST00000504045 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
MATR3-208ENST00000504045 NDUFAF8A1L188 74 aa5.43□□□□□ -1.54
MATR3-208ENST00000504045 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
MATR3-208ENST00000504045 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
MATR3-208ENST00000504045 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
MATR3-208ENST00000504045 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
MATR3-208ENST00000504045 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
MATR3-208ENST00000504045 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
MATR3-208ENST00000504045 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
MATR3-208ENST00000504045 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
MATR3-208ENST00000504045 MT1AP04731 61 aa5.12□□□□□ -1.59
MATR3-208ENST00000504045 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
MATR3-208ENST00000504045 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
MATR3-208ENST00000504045 A0A0A0MQY5 61 aa5.06□□□□□ -1.6
MATR3-208ENST00000504045 KRTAP5-2Q701N4 177 aa4.98□□□□□ -1.61
MATR3-208ENST00000504045 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
MATR3-208ENST00000504045 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
MATR3-208ENST00000504045 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
MATR3-208ENST00000504045 MT3P25713 68 aa4.65□□□□□ -1.67
MATR3-208ENST00000504045 INE1O15225 51 aa4.62□□□□□ -1.67
MATR3-208ENST00000504045 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
MATR3-208ENST00000504045 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
MATR3-208ENST00000504045 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
MATR3-208ENST00000504045 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
MATR3-208ENST00000504045 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
MATR3-208ENST00000504045 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
MATR3-208ENST00000504045 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
MATR3-208ENST00000504045 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
MATR3-208ENST00000504045 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
MATR3-208ENST00000504045 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
MATR3-208ENST00000504045 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
MATR3-208ENST00000504045 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
MATR3-208ENST00000504045 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
MATR3-208ENST00000504045 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
MATR3-208ENST00000504045 PRM1P04553 51 aa3.12□□□□□ -1.91
MATR3-208ENST00000504045 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
MATR3-208ENST00000504045 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
MATR3-208ENST00000504045 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
MATR3-208ENST00000504045 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 81.7 ms