RNA–Protein interactions for RNA: ENST00000503937.5

SEC31A-213, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC31A, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-213ENST00000503937 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
SEC31A-213ENST00000503937 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
SEC31A-213ENST00000503937 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
SEC31A-213ENST00000503937 RNF213Q63HN8 5207 aa3.09□□□□□ -1.92
SEC31A-213ENST00000503937 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
SEC31A-213ENST00000503937 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
SEC31A-213ENST00000503937 MT1HP80294 61 aa3.08□□□□□ -1.92
SEC31A-213ENST00000503937 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SEC31A-213ENST00000503937 MUC2Q02817 5179 aa3.05□□□□□ -1.92
SEC31A-213ENST00000503937 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
SEC31A-213ENST00000503937 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SEC31A-213ENST00000503937 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
SEC31A-213ENST00000503937 MT2AP02795 61 aa2.93□□□□□ -1.94
SEC31A-213ENST00000503937 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
SEC31A-213ENST00000503937 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
SEC31A-213ENST00000503937 MT1FP04733 61 aa2.91□□□□□ -1.94
SEC31A-213ENST00000503937 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
SEC31A-213ENST00000503937 MT1XP80297 61 aa2.86□□□□□ -1.95
SEC31A-213ENST00000503937 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
SEC31A-213ENST00000503937 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
SEC31A-213ENST00000503937 KRTAP2-1Q9BYU5 128 aa2.83□□□□□ -1.96
SEC31A-213ENST00000503937 MT1BP07438 61 aa2.81□□□□□ -1.96
SEC31A-213ENST00000503937 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
SEC31A-213ENST00000503937 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
SEC31A-213ENST00000503937 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
SEC31A-213ENST00000503937 CRCT1Q9UGL9 99 aa2.68□□□□□ -1.98
SEC31A-213ENST00000503937 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
SEC31A-213ENST00000503937 USH2AO75445 5202 aa2.59□□□□□ -1.99
SEC31A-213ENST00000503937 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
SEC31A-213ENST00000503937 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
SEC31A-213ENST00000503937 SSPOA2VEC9 5147 aa2.55□□□□□ -2
SEC31A-213ENST00000503937 KRTAP12-4P60329 112 aa2.54□□□□□ -2
SEC31A-213ENST00000503937 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
SEC31A-213ENST00000503937 MT1LQ93083 61 aa2.52□□□□□ -2.01
SEC31A-213ENST00000503937 MT1EP04732 61 aa2.5□□□□□ -2.01
SEC31A-213ENST00000503937 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
SEC31A-213ENST00000503937 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
SEC31A-213ENST00000503937 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
SEC31A-213ENST00000503937 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
SEC31A-213ENST00000503937 MT1AP04731 61 aa2.36□□□□□ -2.03
SEC31A-213ENST00000503937 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
SEC31A-213ENST00000503937 MT1GP13640 62 aa2.33□□□□□ -2.04
SEC31A-213ENST00000503937 SPRR2EP22531 72 aa2.3□□□□□ -2.04
SEC31A-213ENST00000503937 SPRR2BP35325 72 aa2.3□□□□□ -2.04
SEC31A-213ENST00000503937 SPRR2AP35326 72 aa2.3□□□□□ -2.04
SEC31A-213ENST00000503937 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
SEC31A-213ENST00000503937 KMT2DO14686 5537 aa2.29□□□□□ -2.04
SEC31A-213ENST00000503937 MT1MQ8N339 61 aa2.28□□□□□ -2.04
SEC31A-213ENST00000503937 PRM1P04553 51 aa2.27□□□□□ -2.05
SEC31A-213ENST00000503937 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
SEC31A-213ENST00000503937 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
SEC31A-213ENST00000503937 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
SEC31A-213ENST00000503937 SPRR2DP22532 72 aa2.23□□□□□ -2.05
SEC31A-213ENST00000503937 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SEC31A-213ENST00000503937 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
SEC31A-213ENST00000503937 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SEC31A-213ENST00000503937 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
SEC31A-213ENST00000503937 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.06
SEC31A-213ENST00000503937 NEBP20929 6669 aa2.15□□□□□ -2.07
SEC31A-213ENST00000503937 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
SEC31A-213ENST00000503937 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
SEC31A-213ENST00000503937 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
SEC31A-213ENST00000503937 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
SEC31A-213ENST00000503937 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
SEC31A-213ENST00000503937 MT4P47944 62 aa1.92□□□□□ -2.1
SEC31A-213ENST00000503937 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
SEC31A-213ENST00000503937 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SEC31A-213ENST00000503937 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
SEC31A-213ENST00000503937 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
SEC31A-213ENST00000503937 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
SEC31A-213ENST00000503937 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
SEC31A-213ENST00000503937 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
SEC31A-213ENST00000503937 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SEC31A-213ENST00000503937 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SEC31A-213ENST00000503937 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
SEC31A-213ENST00000503937 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SEC31A-213ENST00000503937 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
SEC31A-213ENST00000503937 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 119.7 ms