RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
PRDM2-213ENST00000503842 ROMO1P60602 79 aa5.27□□□□□ -1.57
PRDM2-213ENST00000503842 TNP1P09430 55 aa5.26□□□□□ -1.57
PRDM2-213ENST00000503842 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
PRDM2-213ENST00000503842 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
PRDM2-213ENST00000503842 LCE1FQ5T754 118 aa5.22□□□□□ -1.57
PRDM2-213ENST00000503842 KMT2DO14686 5537 aa5.19□□□□□ -1.58
PRDM2-213ENST00000503842 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
PRDM2-213ENST00000503842 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
PRDM2-213ENST00000503842 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
PRDM2-213ENST00000503842 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
PRDM2-213ENST00000503842 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
PRDM2-213ENST00000503842 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
PRDM2-213ENST00000503842 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
PRDM2-213ENST00000503842 KRTAP5-9P26371 169 aa5□□□□□ -1.61
PRDM2-213ENST00000503842 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
PRDM2-213ENST00000503842 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
PRDM2-213ENST00000503842 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
PRDM2-213ENST00000503842 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
PRDM2-213ENST00000503842 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
PRDM2-213ENST00000503842 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
PRDM2-213ENST00000503842 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
PRDM2-213ENST00000503842 MT1EP04732 61 aa4.9□□□□□ -1.63
PRDM2-213ENST00000503842 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
PRDM2-213ENST00000503842 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
PRDM2-213ENST00000503842 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
PRDM2-213ENST00000503842 MT1LQ93083 61 aa4.77□□□□□ -1.65
PRDM2-213ENST00000503842 NEBP20929 6669 aa4.76□□□□□ -1.65
PRDM2-213ENST00000503842 SPRR2EP22531 72 aa4.75□□□□□ -1.65
PRDM2-213ENST00000503842 SPRR2BP35325 72 aa4.75□□□□□ -1.65
PRDM2-213ENST00000503842 SPRR2AP35326 72 aa4.75□□□□□ -1.65
PRDM2-213ENST00000503842 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
PRDM2-213ENST00000503842 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
PRDM2-213ENST00000503842 MT1GP13640 62 aa4.68□□□□□ -1.66
PRDM2-213ENST00000503842 MT1MQ8N339 61 aa4.63□□□□□ -1.67
PRDM2-213ENST00000503842 SPRR2DP22532 72 aa4.59□□□□□ -1.67
PRDM2-213ENST00000503842 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
PRDM2-213ENST00000503842 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
PRDM2-213ENST00000503842 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
PRDM2-213ENST00000503842 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
PRDM2-213ENST00000503842 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
PRDM2-213ENST00000503842 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
PRDM2-213ENST00000503842 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
PRDM2-213ENST00000503842 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
PRDM2-213ENST00000503842 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
PRDM2-213ENST00000503842 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
PRDM2-213ENST00000503842 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
PRDM2-213ENST00000503842 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
PRDM2-213ENST00000503842 MT1AP04731 61 aa4.06□□□□□ -1.76
PRDM2-213ENST00000503842 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
PRDM2-213ENST00000503842 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
PRDM2-213ENST00000503842 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
PRDM2-213ENST00000503842 MT4P47944 62 aa3.97□□□□□ -1.77
PRDM2-213ENST00000503842 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
PRDM2-213ENST00000503842 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
PRDM2-213ENST00000503842 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
PRDM2-213ENST00000503842 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
PRDM2-213ENST00000503842 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
PRDM2-213ENST00000503842 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
PRDM2-213ENST00000503842 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
PRDM2-213ENST00000503842 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
PRDM2-213ENST00000503842 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
PRDM2-213ENST00000503842 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
PRDM2-213ENST00000503842 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
PRDM2-213ENST00000503842 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
PRDM2-213ENST00000503842 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
PRDM2-213ENST00000503842 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
PRDM2-213ENST00000503842 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
PRDM2-213ENST00000503842 INE1O15225 51 aa3.1□□□□□ -1.91
PRDM2-213ENST00000503842 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
PRDM2-213ENST00000503842 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
PRDM2-213ENST00000503842 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
PRDM2-213ENST00000503842 PRM1P04553 51 aa2.73□□□□□ -1.97
PRDM2-213ENST00000503842 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
PRDM2-213ENST00000503842 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
PRDM2-213ENST00000503842 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
PRDM2-213ENST00000503842 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 142.2 ms