RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
NDFIP1-202ENST00000503388 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
NDFIP1-202ENST00000503388 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
NDFIP1-202ENST00000503388 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
NDFIP1-202ENST00000503388 LCE3CQ5T5A8 94 aa1.81□□□□□ -2.12
NDFIP1-202ENST00000503388 MT1FP04733 61 aa1.81□□□□□ -2.12
NDFIP1-202ENST00000503388 KRTAP10-5P60370 271 aa1.79□□□□□ -2.12
NDFIP1-202ENST00000503388 MUC2Q02817 5179 aa1.75□□□□□ -2.13
NDFIP1-202ENST00000503388 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
NDFIP1-202ENST00000503388 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
NDFIP1-202ENST00000503388 KRTAP10-7P60409 375 aaPredicted RBP1.73□□□□□ -2.13
NDFIP1-202ENST00000503388 MT1BP07438 61 aa1.73□□□□□ -2.13
NDFIP1-202ENST00000503388 MT1XP80297 61 aa1.73□□□□□ -2.13
NDFIP1-202ENST00000503388 MT1GP13640 62 aa1.72□□□□□ -2.13
NDFIP1-202ENST00000503388 CRCT1Q9UGL9 99 aa1.7□□□□□ -2.14
NDFIP1-202ENST00000503388 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
NDFIP1-202ENST00000503388 MT1LQ93083 61 aa1.67□□□□□ -2.14
NDFIP1-202ENST00000503388 MT1EP04732 61 aa1.64□□□□□ -2.15
NDFIP1-202ENST00000503388 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
NDFIP1-202ENST00000503388 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
NDFIP1-202ENST00000503388 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
NDFIP1-202ENST00000503388 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
NDFIP1-202ENST00000503388 LCE1AQ5T7P2 110 aa1.6□□□□□ -2.15
NDFIP1-202ENST00000503388 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
NDFIP1-202ENST00000503388 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
NDFIP1-202ENST00000503388 KRTAP12-4P60329 112 aa1.59□□□□□ -2.16
NDFIP1-202ENST00000503388 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
NDFIP1-202ENST00000503388 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
NDFIP1-202ENST00000503388 SPRR2EP22531 72 aa1.55□□□□□ -2.16
NDFIP1-202ENST00000503388 SPRR2BP35325 72 aa1.55□□□□□ -2.16
NDFIP1-202ENST00000503388 SPRR2AP35326 72 aa1.55□□□□□ -2.16
NDFIP1-202ENST00000503388 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
NDFIP1-202ENST00000503388 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
NDFIP1-202ENST00000503388 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
NDFIP1-202ENST00000503388 MT1MQ8N339 61 aa1.54□□□□□ -2.16
NDFIP1-202ENST00000503388 KRTAP2-3P0C7H8 128 aa1.53□□□□□ -2.16
NDFIP1-202ENST00000503388 KRTAP2-4Q9BYR9 128 aa1.53□□□□□ -2.16
NDFIP1-202ENST00000503388 SPRR2DP22532 72 aa1.52□□□□□ -2.17
NDFIP1-202ENST00000503388 NEBP20929 6669 aa1.51□□□□□ -2.17
NDFIP1-202ENST00000503388 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
NDFIP1-202ENST00000503388 MT3P25713 68 aa1.51□□□□□ -2.17
NDFIP1-202ENST00000503388 MT1AP04731 61 aa1.49□□□□□ -2.17
NDFIP1-202ENST00000503388 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
NDFIP1-202ENST00000503388 KRTAP19-7Q3SYF9 63 aa1.48□□□□□ -2.17
NDFIP1-202ENST00000503388 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
NDFIP1-202ENST00000503388 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
NDFIP1-202ENST00000503388 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
NDFIP1-202ENST00000503388 KRTAP2-2Q9BYT5 123 aa1.44□□□□□ -2.18
NDFIP1-202ENST00000503388 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
NDFIP1-202ENST00000503388 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
NDFIP1-202ENST00000503388 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
NDFIP1-202ENST00000503388 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
NDFIP1-202ENST00000503388 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
NDFIP1-202ENST00000503388 KMT2DO14686 5537 aa1.37□□□□□ -2.19
NDFIP1-202ENST00000503388 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
NDFIP1-202ENST00000503388 PRM1P04553 51 aa1.3□□□□□ -2.2
NDFIP1-202ENST00000503388 KRTAP9-6A8MVA2 160 aa1.27□□□□□ -2.21
NDFIP1-202ENST00000503388 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
NDFIP1-202ENST00000503388 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
NDFIP1-202ENST00000503388 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
NDFIP1-202ENST00000503388 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
NDFIP1-202ENST00000503388 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
NDFIP1-202ENST00000503388 MT4P47944 62 aa1.19□□□□□ -2.22
NDFIP1-202ENST00000503388 LCE1BQ5T7P3 118 aa1.16□□□□□ -2.22
NDFIP1-202ENST00000503388 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
NDFIP1-202ENST00000503388 LCE1FQ5T754 118 aa1.15□□□□□ -2.23
NDFIP1-202ENST00000503388 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
NDFIP1-202ENST00000503388 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
NDFIP1-202ENST00000503388 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
NDFIP1-202ENST00000503388 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
NDFIP1-202ENST00000503388 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
NDFIP1-202ENST00000503388 LCE1CQ5T751 118 aa1.08□□□□□ -2.24
NDFIP1-202ENST00000503388 FSIP2Q5CZC0 6907 aa1.06□□□□□ -2.24
NDFIP1-202ENST00000503388 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
NDFIP1-202ENST00000503388 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
NDFIP1-202ENST00000503388 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
NDFIP1-202ENST00000503388 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
NDFIP1-202ENST00000503388 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms