RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
PDLIM7-209ENST00000503346 A6NED7 52 aa6.61□□□□□ -1.35
PDLIM7-209ENST00000503346 MT1GP13640 62 aa6.54□□□□□ -1.36
PDLIM7-209ENST00000503346 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
PDLIM7-209ENST00000503346 MT1LQ93083 61 aa6.51□□□□□ -1.37
PDLIM7-209ENST00000503346 PP632Q6XCG6 107 aa6.48□□□□□ -1.37
PDLIM7-209ENST00000503346 SVIPQ8NHG7 77 aa6.46□□□□□ -1.38
PDLIM7-209ENST00000503346 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
PDLIM7-209ENST00000503346 MT1MQ8N339 61 aa6.43□□□□□ -1.38
PDLIM7-209ENST00000503346 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
PDLIM7-209ENST00000503346 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
PDLIM7-209ENST00000503346 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
PDLIM7-209ENST00000503346 ROMO1P60602 79 aa6.27□□□□□ -1.41
PDLIM7-209ENST00000503346 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
PDLIM7-209ENST00000503346 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
PDLIM7-209ENST00000503346 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
PDLIM7-209ENST00000503346 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
PDLIM7-209ENST00000503346 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
PDLIM7-209ENST00000503346 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
PDLIM7-209ENST00000503346 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
PDLIM7-209ENST00000503346 KRTAP5-4Q6L8H1 288 aa6.01□□□□□ -1.45
PDLIM7-209ENST00000503346 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
PDLIM7-209ENST00000503346 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
PDLIM7-209ENST00000503346 MT4P47944 62 aa5.94□□□□□ -1.46
PDLIM7-209ENST00000503346 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
PDLIM7-209ENST00000503346 PRO0628Q9UI54 55 aa5.93□□□□□ -1.46
PDLIM7-209ENST00000503346 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
PDLIM7-209ENST00000503346 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
PDLIM7-209ENST00000503346 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
PDLIM7-209ENST00000503346 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
PDLIM7-209ENST00000503346 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
PDLIM7-209ENST00000503346 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
PDLIM7-209ENST00000503346 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
PDLIM7-209ENST00000503346 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
PDLIM7-209ENST00000503346 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
PDLIM7-209ENST00000503346 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
PDLIM7-209ENST00000503346 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
PDLIM7-209ENST00000503346 MT1AP04731 61 aa5.55□□□□□ -1.52
PDLIM7-209ENST00000503346 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
PDLIM7-209ENST00000503346 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
PDLIM7-209ENST00000503346 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
PDLIM7-209ENST00000503346 KRTAP5-10Q6L8G5 202 aa5.46□□□□□ -1.54
PDLIM7-209ENST00000503346 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
PDLIM7-209ENST00000503346 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
PDLIM7-209ENST00000503346 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
PDLIM7-209ENST00000503346 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
PDLIM7-209ENST00000503346 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
PDLIM7-209ENST00000503346 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
PDLIM7-209ENST00000503346 MT3P25713 68 aa5.07□□□□□ -1.6
PDLIM7-209ENST00000503346 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
PDLIM7-209ENST00000503346 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
PDLIM7-209ENST00000503346 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
PDLIM7-209ENST00000503346 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
PDLIM7-209ENST00000503346 MUC5BQ9HC84 5762 aaPredicted RBP4.62□□□□□ -1.67
PDLIM7-209ENST00000503346 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
PDLIM7-209ENST00000503346 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
PDLIM7-209ENST00000503346 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
PDLIM7-209ENST00000503346 H3BS24 57 aa4.49□□□□□ -1.69
PDLIM7-209ENST00000503346 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
PDLIM7-209ENST00000503346 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
PDLIM7-209ENST00000503346 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
PDLIM7-209ENST00000503346 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
PDLIM7-209ENST00000503346 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
PDLIM7-209ENST00000503346 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
PDLIM7-209ENST00000503346 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
PDLIM7-209ENST00000503346 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
PDLIM7-209ENST00000503346 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
PDLIM7-209ENST00000503346 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
PDLIM7-209ENST00000503346 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
PDLIM7-209ENST00000503346 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
PDLIM7-209ENST00000503346 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
PDLIM7-209ENST00000503346 INE1O15225 51 aa3.59□□□□□ -1.83
PDLIM7-209ENST00000503346 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
PDLIM7-209ENST00000503346 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
PDLIM7-209ENST00000503346 PRM1P04553 51 aa3.21□□□□□ -1.9
PDLIM7-209ENST00000503346 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PDLIM7-209ENST00000503346 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
PDLIM7-209ENST00000503346 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms