RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394		A0A0A0MQY5	61 aa		4.93	□□□□□ -1.62
MATR3-231	ENST00000502394	LCE1E	Q5T753	118 aa		4.91	□□□□□ -1.62
MATR3-231	ENST00000502394	ROMO1	P60602	79 aa		4.87	□□□□□ -1.63
MATR3-231	ENST00000502394	PMAIP1	Q13794	54 aa		4.85	□□□□□ -1.63
MATR3-231	ENST00000502394	KRTAP10-12	P60413	245 aa		4.83	□□□□□ -1.64
MATR3-231	ENST00000502394	TNP1	P09430	55 aa		4.81	□□□□□ -1.64
MATR3-231	ENST00000502394	KRTAP25-1	Q3LHN0	102 aa		4.8	□□□□□ -1.64
MATR3-231	ENST00000502394	KMT2D	O14686	5537 aa		4.71	□□□□□ -1.66
MATR3-231	ENST00000502394	LCE3A	Q5TA76	89 aa		4.67	□□□□□ -1.66
MATR3-231	ENST00000502394	MACF1	Q9UPN3	7388 aa	Known RBP	4.65	□□□□□ -1.67
MATR3-231	ENST00000502394	KTN1-AS1	Q86SY8	53 aa		4.62	□□□□□ -1.67
MATR3-231	ENST00000502394	LCE1F	Q5T754	118 aa		4.6	□□□□□ -1.67
MATR3-231	ENST00000502394	PP632	Q6XCG6	107 aa		4.59	□□□□□ -1.67
MATR3-231	ENST00000502394	KRTAP8-1	Q8IUC2	63 aa		4.59	□□□□□ -1.67
MATR3-231	ENST00000502394	PRAC1	Q96KF2	57 aa		4.58	□□□□□ -1.68
MATR3-231	ENST00000502394	KRTAP19-7	Q3SYF9	63 aa		4.55	□□□□□ -1.68
MATR3-231	ENST00000502394	KRTAP19-5	Q3LI72	72 aa		4.53	□□□□□ -1.68
MATR3-231	ENST00000502394	KRTAP5-9	P26371	169 aa		4.52	□□□□□ -1.69
MATR3-231	ENST00000502394	KRTAP6-3	Q3LI67	103 aa		4.5	□□□□□ -1.69
MATR3-231	ENST00000502394	SYNE2	Q8WXH0	6885 aa	Known RBP	4.48	□□□□□ -1.69
MATR3-231	ENST00000502394	MT1E	P04732	61 aa		4.47	□□□□□ -1.69
MATR3-231	ENST00000502394	KRTAP12-3	P60328	96 aa		4.47	□□□□□ -1.69
MATR3-231	ENST00000502394	SPRR2F	Q96RM1	72 aa		4.44	□□□□□ -1.7
MATR3-231	ENST00000502394	MUC12	Q9UKN1	5478 aa		4.42	□□□□□ -1.7
MATR3-231	ENST00000502394	KRTAP9-6	A8MVA2	160 aa		4.37	□□□□□ -1.71
MATR3-231	ENST00000502394	MT1L	Q93083	61 aa		4.35	□□□□□ -1.71
MATR3-231	ENST00000502394	MDN1	Q9NU22	5596 aa		4.35	□□□□□ -1.71
MATR3-231	ENST00000502394	KRTAP19-3	Q7Z4W3	81 aa		4.31	□□□□□ -1.72
MATR3-231	ENST00000502394	KRTAP5-1	Q6L8H4	278 aa		4.29	□□□□□ -1.72
MATR3-231	ENST00000502394	LCE3C	Q5T5A8	94 aa		4.28	□□□□□ -1.72
MATR3-231	ENST00000502394	MT1G	P13640	62 aa		4.26	□□□□□ -1.73
MATR3-231	ENST00000502394	SPRR2E	P22531	72 aa		4.26	□□□□□ -1.73
MATR3-231	ENST00000502394	SPRR2B	P35325	72 aa		4.26	□□□□□ -1.73
MATR3-231	ENST00000502394	SPRR2A	P35326	72 aa		4.26	□□□□□ -1.73
MATR3-231	ENST00000502394	MT1M	Q8N339	61 aa		4.21	□□□□□ -1.74
MATR3-231	ENST00000502394	NEB	P20929	6669 aa		4.21	□□□□□ -1.74
MATR3-231	ENST00000502394	KRTAP5-4	Q6L8H1	288 aa		4.11	□□□□□ -1.75
MATR3-231	ENST00000502394	KRTAP4-4	Q9BYR3	166 aa		4.11	□□□□□ -1.75
MATR3-231	ENST00000502394	SPRR2D	P22532	72 aa		4.1	□□□□□ -1.75
MATR3-231	ENST00000502394	KRTAP4-3	Q9BYR4	195 aa		4.1	□□□□□ -1.75
MATR3-231	ENST00000502394	SPRR5	A0A1B0GTR4	108 aa		4.06	□□□□□ -1.76
MATR3-231	ENST00000502394	NDUFAF8	A1L188	74 aa		4.01	□□□□□ -1.77
MATR3-231	ENST00000502394	DST	Q03001	7570 aa	Known RBP	3.98	□□□□□ -1.77
MATR3-231	ENST00000502394	KRTAP2-3	P0C7H8	128 aa		3.94	□□□□□ -1.78
MATR3-231	ENST00000502394	KRTAP2-4	Q9BYR9	128 aa		3.94	□□□□□ -1.78
MATR3-231	ENST00000502394	KRTAP20-1	Q3LI63	56 aa		3.9	□□□□□ -1.79
MATR3-231	ENST00000502394	LCE3E	Q5T5B0	92 aa		3.9	□□□□□ -1.79
MATR3-231	ENST00000502394	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.85	□□□□□ -1.79
MATR3-231	ENST00000502394	KRTAP2-1	Q9BYU5	128 aa		3.85	□□□□□ -1.79
MATR3-231	ENST00000502394	OBSCN	Q5VST9	7968 aa		3.8	□□□□□ -1.8
MATR3-231	ENST00000502394	MT1A	P04731	61 aa		3.71	□□□□□ -1.82
MATR3-231	ENST00000502394	SYNE1	Q8NF91	8797 aa	Known RBP	3.71	□□□□□ -1.82
MATR3-231	ENST00000502394	LUZP6	Q538Z0	58 aa		3.7	□□□□□ -1.82
MATR3-231	ENST00000502394	KRTAP6-1	Q3LI64	71 aa		3.66	□□□□□ -1.82
MATR3-231	ENST00000502394	MT4	P47944	62 aa		3.55	□□□□□ -1.84
MATR3-231	ENST00000502394	KRTAP12-4	P60329	112 aa		3.54	□□□□□ -1.84
MATR3-231	ENST00000502394	HMCN1	Q96RW7	5635 aa		3.53	□□□□□ -1.84
MATR3-231	ENST00000502394	KRTAP20-2	Q3LI61	65 aa		3.49	□□□□□ -1.85
MATR3-231	ENST00000502394	KRTAP5-2	Q701N4	177 aa		3.4	□□□□□ -1.87
MATR3-231	ENST00000502394	KRTAP6-2	Q3LI66	62 aa		3.38	□□□□□ -1.87
MATR3-231	ENST00000502394	AHNAK2	Q8IVF2	5795 aa		3.25	□□□□□ -1.89
MATR3-231	ENST00000502394	LCE1C	Q5T751	118 aa		3.22	□□□□□ -1.89
MATR3-231	ENST00000502394	LCE1B	Q5T7P3	118 aa		3.22	□□□□□ -1.89
MATR3-231	ENST00000502394	LCE3D	Q9BYE3	92 aa		3.12	□□□□□ -1.91
MATR3-231	ENST00000502394	KRTAP5-10	Q6L8G5	202 aa		3.08	□□□□□ -1.92
MATR3-231	ENST00000502394	GPR98	Q8WXG9	6306 aa		3	□□□□□ -1.93
MATR3-231	ENST00000502394	KRTAP5-8	O75690	187 aa		2.96	□□□□□ -1.94
MATR3-231	ENST00000502394	INE1	O15225	51 aa		2.92	□□□□□ -1.94
MATR3-231	ENST00000502394	MUC5AC	P98088	5654 aa		2.89	□□□□□ -1.95
MATR3-231	ENST00000502394	KRTAP5-7	Q6L8G8	165 aa		2.88	□□□□□ -1.95
MATR3-231	ENST00000502394	MUC19	Q7Z5P9	8384 aa		2.69	□□□□□ -1.98
MATR3-231	ENST00000502394	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.61	□□□□□ -1.99
MATR3-231	ENST00000502394	PRM1	P04553	51 aa		2.53	□□□□□ -2
MATR3-231	ENST00000502394	AHNAK	Q09666	5890 aa	Known RBP	2.52	□□□□□ -2.01
MATR3-231	ENST00000502394	KRTAP21-2	Q3LI59	83 aa		2.42	□□□□□ -2.02
MATR3-231	ENST00000502394	PHGR1	C9JFL3	82 aa		2.11	□□□□□ -2.07
MATR3-231	ENST00000502394	KRTAP21-1	Q3LI58	79 aa		1.55	□□□□□ -2.16
MATR3-231	ENST00000502394	MUC16	Q8WXI7	14507 aa		1.46	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 94.4 ms